Clone BS32552 Report

Search the DGRC for BS32552

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:52
Vector:pDNR-Dual
Associated Gene/TranscriptCG15169-RA
Protein status:BS32552.pep: gold
Sequenced Size:1070

Clone Sequence Records

BS32552.complete Sequence

1070 bp assembled on 2013-09-16

GenBank Submission: KX801446

> BS32552.complete
GAAGTTATCAGTCGACATGCGGATGAGATTGCTGGTCATTTGGATTTCCC
TAACTGCTCTCCTTGAATGGAGCAGGGCGCAGGAGGACAACATTGAAGAG
TTCAGCTTAAGCGGCGGACTAGCGGGTGAAAAGTCAGAAAACTCAGGCAT
TGAAGCCGGTGAAAATGACACAGAATCCCTAGGACAAAGTCACTTATTTT
TGAACACAACACAAAGTCCAACTGATGACCCTGAGCCTACACAGGAACTG
TCATCTATTGAAAGTCAAGTTGGACAGGTAGGCCACCAGTCTGGAGAGGA
TGAGAAGGAACCGGAAATCACAAGCTTAGACACTAATTCGGAAACGGATA
ACAAATTAGAAGGGGACAAAGAAGAGCCAGAAAAGGAATCCACCGGGAAT
TCCGGTGGCTTTGCGCCAACTCAAGTTCCTCAAACCGACAAAGTAGACCA
ATCGTCCGGACATATGGATACTTCGGACTCGTCTTCAGACTCTTCAGTGA
CTCCCGATACTCGCCCATCAACTTCACTAGAGGAGGTCCTGGAAACTCAC
CCAACAAACAAAACTGAGGAACCAATGGGAGGATCGCCCGATTACCCGGC
TGATGGGCCCCAGGAGGACACCACAACTCCACCCCCAGAAGAAACAACCT
TGGCACCACACAAGCCCCCAGTTGCAGATCCAGAACAGAAACCCCTAAGC
TGCTATTCCTGCATGTTCTGCAACAAAACGATCACCAATGAAACAAAGTC
AAACTGCGGCCCGATACCTGGCAAAAGGAATGGATGTCGCACCATACTGC
TCAACGATCCCAATGTCGTTCCGGGGAAGAAGTACTTCCTGCATCGGGGC
TGTGTATCCGAGTTAGATATGGAGCTATCTCGCTATTGCGCCGAGAATGA
GAAGCTGTGTCCCACGTGCTACGAGGACAATTGTAATGTTCACAACATGA
CTGAATATGAAGTCACTCCGGGCTCTGCAGCAGTCACCCATCATCCGGGG
GTGCTATTCCTTATCTGGAGCATCGGTTTGGTTAGCTGGCAGGTGGCTTT
TTAAAAGCTTTCTAGACCAT

BS32552.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:58:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15169-RA 1038 CG15169-PA 1..1038 17..1054 5190 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:58:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG15169-RA 1390 CG15169-RA 56..1095 17..1056 5200 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:58:21
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18991075..18992114 17..1056 5200 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:58:22 has no hits.

BS32552.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:01 Download gff for BS32552.complete
Subject Subject Range Query Range Percent Splice Strand
CG15169-RA 56..1091 17..1052 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:41 Download gff for BS32552.complete
Subject Subject Range Query Range Percent Splice Strand
CG15169-RA 56..1091 17..1052 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:41 Download gff for BS32552.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18991075..18992110 17..1052 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:01 Download gff for BS32552.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18991075..18992110 17..1052 100   Plus

BS32552.pep Sequence

Translation from 16 to 1053

> BS32552.pep
MRMRLLVIWISLTALLEWSRAQEDNIEEFSLSGGLAGEKSENSGIEAGEN
DTESLGQSHLFLNTTQSPTDDPEPTQELSSIESQVGQVGHQSGEDEKEPE
ITSLDTNSETDNKLEGDKEEPEKESTGNSGGFAPTQVPQTDKVDQSSGHM
DTSDSSSDSSVTPDTRPSTSLEEVLETHPTNKTEEPMGGSPDYPADGPQE
DTTTPPPEETTLAPHKPPVADPEQKPLSCYSCMFCNKTITNETKSNCGPI
PGKRNGCRTILLNDPNVVPGKKYFLHRGCVSELDMELSRYCAENEKLCPT
CYEDNCNVHNMTEYEVTPGSAAVTHHPGVLFLIWSIGLVSWQVAF*

BS32552.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG15169-PA 345 CG15169-PA 1..345 1..345 1855 100 Plus