BS32553.complete Sequence
407 bp assembled on 2013-09-16
GenBank Submission: KX802322
> BS32553.complete
GAAGTTATCAGTCGACATGTCGAGTGCAGTGCTGATAGCTTTCTGCGTCT
TGGTTGTTTTGACCGGACAATCGGTTGGCCAAAATGTGGCCGTGCAACAG
TCAATTGATTGGGCCAATGAACAGTTCAAAATCGCTCAAGTTGTGGCCCA
AGGAAAGCTACCCAACAGTGTTGAGGCCCGGAACGATGCCAATGACCAAT
TGGACACTCTGAAATTGGCTTTATCCCATTGCGAGGCTGAGCTGAAATCC
ACCCAAGGTGTCGATCTTCACAAGACTTGTGTTAAAGCCGTCTTCGCTGG
CTTTTATACTGCCTTGGATCGCTTGGCCGCGGAACACTGGCCCATTTATG
GAGCCACCTCTGGTGCCGCCCGAATTGGCTTCTTCTGCTAAAAGCTTTCT
AGACCAT
BS32553.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:58:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34284-RA | 375 | CG34284-PA | 1..375 | 17..391 | 1875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:58:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34284-RA | 520 | CG34284-RA | 27..401 | 17..391 | 1875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:58:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18902457..18902787 | 391..61 | 1655 | 100 | Minus |
3R | 32079331 | 3R | 18902863..18902907 | 61..17 | 225 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 13:58:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 3240..3304 | 28..92 | 108 | 66.7 | Plus |
BS32553.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:03 Download gff for
BS32553.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34284-RA | 27..399 | 17..389 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:42 Download gff for
BS32553.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34284-RA | 27..399 | 17..389 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:42 Download gff for
BS32553.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18902459..18902786 | 62..389 | 100 | <- | Minus |
3R | 18902863..18902907 | 17..61 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:03 Download gff for
BS32553.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14728181..14728508 | 62..389 | 100 | <- | Minus |
arm_3R | 14728585..14728629 | 17..61 | 100 | | Minus |
BS32553.pep Sequence
Translation from 16 to 390
> BS32553.pep
MSSAVLIAFCVLVVLTGQSVGQNVAVQQSIDWANEQFKIAQVVAQGKLPN
SVEARNDANDQLDTLKLALSHCEAELKSTQGVDLHKTCVKAVFAGFYTAL
DRLAAEHWPIYGATSGAARIGFFC*
BS32553.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34284-PA | 124 | CG34284-PA | 1..124 | 1..124 | 634 | 100 | Plus |