Clone BS32553 Report

Search the DGRC for BS32553

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:53
Vector:pDNR-Dual
Associated Gene/TranscriptCG34284-RA
Protein status:BS32553.pep: gold
Sequenced Size:407

Clone Sequence Records

BS32553.complete Sequence

407 bp assembled on 2013-09-16

GenBank Submission: KX802322

> BS32553.complete
GAAGTTATCAGTCGACATGTCGAGTGCAGTGCTGATAGCTTTCTGCGTCT
TGGTTGTTTTGACCGGACAATCGGTTGGCCAAAATGTGGCCGTGCAACAG
TCAATTGATTGGGCCAATGAACAGTTCAAAATCGCTCAAGTTGTGGCCCA
AGGAAAGCTACCCAACAGTGTTGAGGCCCGGAACGATGCCAATGACCAAT
TGGACACTCTGAAATTGGCTTTATCCCATTGCGAGGCTGAGCTGAAATCC
ACCCAAGGTGTCGATCTTCACAAGACTTGTGTTAAAGCCGTCTTCGCTGG
CTTTTATACTGCCTTGGATCGCTTGGCCGCGGAACACTGGCCCATTTATG
GAGCCACCTCTGGTGCCGCCCGAATTGGCTTCTTCTGCTAAAAGCTTTCT
AGACCAT

BS32553.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:58:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG34284-RA 375 CG34284-PA 1..375 17..391 1875 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:58:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG34284-RA 520 CG34284-RA 27..401 17..391 1875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:58:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18902457..18902787 391..61 1655 100 Minus
3R 32079331 3R 18902863..18902907 61..17 225 100 Minus
Blast to na_te.dros performed 2014-11-28 13:58:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Penelope 4158 Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). 3240..3304 28..92 108 66.7 Plus

BS32553.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:03 Download gff for BS32553.complete
Subject Subject Range Query Range Percent Splice Strand
CG34284-RA 27..399 17..389 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:42 Download gff for BS32553.complete
Subject Subject Range Query Range Percent Splice Strand
CG34284-RA 27..399 17..389 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:42 Download gff for BS32553.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18902459..18902786 62..389 100 <- Minus
3R 18902863..18902907 17..61 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:03 Download gff for BS32553.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14728181..14728508 62..389 100 <- Minus
arm_3R 14728585..14728629 17..61 100   Minus

BS32553.pep Sequence

Translation from 16 to 390

> BS32553.pep
MSSAVLIAFCVLVVLTGQSVGQNVAVQQSIDWANEQFKIAQVVAQGKLPN
SVEARNDANDQLDTLKLALSHCEAELKSTQGVDLHKTCVKAVFAGFYTAL
DRLAAEHWPIYGATSGAARIGFFC*

BS32553.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG34284-PA 124 CG34284-PA 1..124 1..124 634 100 Plus