BS32554.complete Sequence
845 bp assembled on 2013-09-16
GenBank Submission: KX801088
> BS32554.complete
GAAGTTATCAGTCGACATGAATTTCGCATCTTGTCTTGCTGTGTTATCAT
GGATGCTGGCTAATCAGGGATCGGCACAGCTTCTTGACCAGAACTGTGCC
GAAGTTTCACGTCTTTCTAATGATATAATATTTAGTAGACCGTGGATGGC
ACTGGTCTTATTGCCCAATAAAACCTGCAGTGGCGCCCTGATTCACAAAT
ACTTTGTGATAACATCAGCAAGCTGTGTTTTCAATCAAGAGAGAGCCATC
GTCCGCTTGGGGCAGTTGAGCATTAAACAAGAGCATATTGTTAGTTATAG
CAGTGATGATTACCATGTGCAAAGTGCCTACATTCATAGGTTCTATGAGA
AAAGCAATTTCGAGCATGACATAGCTTTGCTGGAACTTCAGAACGATGTG
CTCTACAAGGCCCACATACGTCCAATTTGCCTTTGGTTAGACAAATCTGA
TATCGACACACAAATGTTTAAAAGATATGAAACATTCCGCTGGGGCATAG
ATGAGAAGTACATATTGCCTGCGGCCAAGACAAGCAAAATAAAACACATC
AGCCAAGTCAAGTGCGAAAATGCCTTCAAATTGTATCCGCAGAATTCGCA
TATCTGTGCTGGCTATAAGAACAAAAGCAAGTGCGTGGAAACAGGAAGTC
CCTTGTTTAAAAAGATACGCTATTACACAAAAATTCGTTACACTCTATTC
GGAATTCAGAGTTATGGCGAATCGAGGACGTGTTTATATACCGATGTGAC
GAAATACATTGACTGGATTATGGGAGTCATTCAAAATGTTAATGTGATAG
TGTCGAATGGGGAAAATAGCTACGCTTAAAAGCTTTCTAGACCAT
BS32554.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:58:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34436-RA | 813 | CG34436-PA | 1..813 | 17..829 | 4065 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:58:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34436-RA | 853 | CG34436-RA | 7..819 | 17..829 | 4065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:58:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28282932..28283514 | 247..829 | 2915 | 100 | Plus |
| 3R | 32079331 | 3R | 28282586..28282769 | 17..200 | 920 | 100 | Plus |
| 3R | 32079331 | 3R | 28282830..28282875 | 201..246 | 230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:58:31 has no hits.
BS32554.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:05 Download gff for
BS32554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34436-RA | 7..817 | 17..827 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:44 Download gff for
BS32554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34436-RA | 7..817 | 17..827 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:44 Download gff for
BS32554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28282586..28282769 | 17..200 | 100 | -> | Plus |
| 3R | 28282830..28282875 | 201..246 | 100 | -> | Plus |
| 3R | 28282932..28283512 | 247..827 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:05 Download gff for
BS32554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24108308..24108491 | 17..200 | 100 | -> | Plus |
| arm_3R | 24108552..24108597 | 201..246 | 100 | -> | Plus |
| arm_3R | 24108654..24109234 | 247..827 | 100 | | Plus |
BS32554.pep Sequence
Translation from 16 to 828
> BS32554.pep
MNFASCLAVLSWMLANQGSAQLLDQNCAEVSRLSNDIIFSRPWMALVLLP
NKTCSGALIHKYFVITSASCVFNQERAIVRLGQLSIKQEHIVSYSSDDYH
VQSAYIHRFYEKSNFEHDIALLELQNDVLYKAHIRPICLWLDKSDIDTQM
FKRYETFRWGIDEKYILPAAKTSKIKHISQVKCENAFKLYPQNSHICAGY
KNKSKCVETGSPLFKKIRYYTKIRYTLFGIQSYGESRTCLYTDVTKYIDW
IMGVIQNVNVIVSNGENSYA*
BS32554.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34436-PA | 270 | CG34436-PA | 1..270 | 1..270 | 1429 | 100 | Plus |
| CG34437-PA | 266 | CG34437-PA | 1..259 | 1..268 | 535 | 42.9 | Plus |
| CG33465-PC | 488 | CG33465-PC | 7..267 | 7..257 | 318 | 33.5 | Plus |
| CG30087-PA | 277 | CG30087-PA | 49..270 | 37..251 | 297 | 32.3 | Plus |
| CG30091-PA | 526 | CG30091-PA | 6..284 | 7..262 | 284 | 30 | Plus |
