Clone BS32555 Report

Search the DGRC for BS32555

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptTaf12L-RA
Protein status:BS32555.pep: full length peptide match
Sequenced Size:449

Clone Sequence Records

BS32555.complete Sequence

449 bp assembled on 2013-09-16

GenBank Submission: KX805355

> BS32555.complete
GAAGTTATCAGTCGACATGGATAGTAACATGGAACCTTGGTCCTTTGCCC
TCAATTTCGATGACAGCGATAAATCGTCGGATAACGAGAGCCACTCTTCG
ACCAGATCCTCGAGCCGCTCCAGTGACACCAGCATAGACACCAGCTCCGT
GGAGAAGGAGCCAGCTAGCGTAATTGAGAGCCAGTCTGTCCCTGGCGGAA
GCTACGATATTATCTCCAAGACCAACATGCTGCAATTTGTGCAGAAAATC
GATGCAAATTCATCGCTGGACGATCAAGGTTGCGATATGATGGCCAGAAT
AGCCGATGCCTTTGTTAACGACATATCCATGCGCATAGTTAAGTTGGCCA
AGTATCGAAAGAGCGACGTTAGCGTGCTGGACCTGAAGTTCATCCTCAAG
CGGGAGTTCAACATGGAGTTCCCAATTGAATAAAAGCTTTCTAGACCAT

BS32555.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
Taf12L-RA 417 CG15632-PA 1..417 17..433 2085 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
Taf12L-RA 591 CG15632-RA 17..435 16..434 2095 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:58:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4700991..4701216 434..209 1130 100 Minus
2L 23513712 2L 4701277..4701469 208..16 965 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:58:36 has no hits.

BS32555.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:08 Download gff for BS32555.complete
Subject Subject Range Query Range Percent Splice Strand
Taf12L-RA 18..432 17..431 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:46 Download gff for BS32555.complete
Subject Subject Range Query Range Percent Splice Strand
Taf12L-RA 18..432 17..431 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:46 Download gff for BS32555.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4700994..4701216 209..431 100 <- Minus
2L 4701277..4701468 17..208 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:08 Download gff for BS32555.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4700994..4701216 209..431 100 <- Minus
arm_2L 4701277..4701468 17..208 100   Minus

BS32555.pep Sequence

Translation from 16 to 432

> BS32555.pep
MDSNMEPWSFALNFDDSDKSSDNESHSSTRSSSRSSDTSIDTSSVEKEPA
SVIESQSVPGGSYDIISKTNMLQFVQKIDANSSLDDQGCDMMARIADAFV
NDISMRIVKLAKYRKSDVSVLDLKFILKREFNMEFPIE*

BS32555.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:46
Subject Length Description Subject Range Query Range Score Percent Strand
Taf12L-PA 138 CG15632-PA 1..138 1..138 690 100 Plus