BS32559.complete Sequence
572 bp assembled on 2013-09-16
GenBank Submission: KX805629
> BS32559.complete
GAAGTTATCAGTCGACATGGCAACAAGCGCCAAACTGATGCTAGGCAGCG
GCCTCTGCCAAAAGCTAAGCCAGCTTACCAGGCAAATACACATGCAACCG
GCACTTATGTCCAGTTTTCGTTCATCCCGCGAAGTTCAGGAGCTGGACAA
GTATCCTGAAGTGGAGGTGGTGGCCAATCCGCCCGAGTGGCGTTTTGTGG
AGCGCTTGCTACCAGCGAAGACAGTACCACAGCCGGTGGAGAAGCCAAAA
TATCCATCCGGCTGGCAGCCACAAAAGGAGGATGGCTCAGAACTGGGTTA
CCATGTGGCCAGGACGAAGAATCACATGGTGCCCGTGTATCTGCACACCA
GGTTCCGTGGCCAGCGCCGGATCACGGTGGTGCGACGCGTCCAAGGAGAC
ATTTGGACGCTGGAAAAGGATCTGCGTGCGGTGGTGGAGCAGTCGCGAAA
CGGCAAGGTCTGCGCCACGAGAATCAATGAGCTGAGCGGTCAGATACACT
TCCATGGTGACCACGTGGACGTCCTGCGTGACTATCTCAAGGAGAAGGGC
TTCTGAAAGCTTTCTAGACCAT
BS32559.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:58:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL49-RB | 540 | CG4647-PB | 1..540 | 17..556 | 2700 | 100 | Plus |
| mRpL49-RA | 540 | CG4647-PA | 1..540 | 17..556 | 2700 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:58:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL49-RB | 774 | CG4647-RB | 82..624 | 15..557 | 2715 | 100 | Plus |
| mRpL49-RA | 674 | CG4647-RA | 82..624 | 15..557 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:58:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12907306..12907792 | 71..557 | 2435 | 100 | Plus |
| X | 23542271 | X | 12907186..12907244 | 15..73 | 295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:58:04 has no hits.
BS32559.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:02:54 Download gff for
BS32559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL49-RA | 84..622 | 17..555 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:33 Download gff for
BS32559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL49-RA | 84..622 | 17..555 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:33 Download gff for
BS32559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12907188..12907244 | 17..73 | 100 | -> | Plus |
| X | 12907309..12907790 | 74..555 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:02:54 Download gff for
BS32559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12801221..12801277 | 17..73 | 100 | -> | Plus |
| arm_X | 12801342..12801823 | 74..555 | 100 | | Plus |
BS32559.pep Sequence
Translation from 16 to 555
> BS32559.pep
MATSAKLMLGSGLCQKLSQLTRQIHMQPALMSSFRSSREVQELDKYPEVE
VVANPPEWRFVERLLPAKTVPQPVEKPKYPSGWQPQKEDGSELGYHVART
KNHMVPVYLHTRFRGQRRITVVRRVQGDIWTLEKDLRAVVEQSRNGKVCA
TRINELSGQIHFHGDHVDVLRDYLKEKGF*
BS32559.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL49-PB | 179 | CG4647-PB | 1..179 | 1..179 | 943 | 100 | Plus |
| mRpL49-PA | 179 | CG4647-PA | 1..179 | 1..179 | 943 | 100 | Plus |
