BS32563.complete Sequence
1634 bp assembled on 2013-09-16
GenBank Submission: KX805082
> BS32563.complete
GAAGTTATCAGTCGACATGGAGTTTGGTCTGAAGAAACGCGCGAGACATG
AGGTGAAGGTGGAGGTGGCCAGCCTGGAAACCAAGTACCCGCACAACGTC
ATGCTGTACCACTATCCGCCGACGGAGGACGTGCACATAGACGAATTCGA
GGAGCTGGCTCTAGAGCGCTTGCGCCTTCTCCGCGTCCTGGATCGCGCAA
GCACCCGGAACCTGCGCGTGCTCTCAGATGAATGGAAGGAAATCGTGAGT
GCGGACCTGACCCGCGAGGGATTGCGCAGCTATTTAAGGCTCTGCTCCAC
CGGCGGAAGCGCCAAGCACGAGGCGGATATCCAGACCCGCAGGCGGGACT
ATCTTTCGCACTTCATCTTGCGGCTGGCCTACTGCCGCTCCGAGGACCTT
GCGCGCTGGTTCGTGGCCCGCGAAATGGAGCTCTTCCGGTACAAATTCGC
TGCACTTAGCAGCTTCGAGGTGAAGCAGTTCCTTGAGGCCAACGGCTTTG
AGATTCACCCCCTCACCGAGGCCCAGAAGGACGAAGTCAAGGACGGCCTG
TACGAGAGCACGGTCGGACAGAGCGTGGCGAAGATCGAGCTGTTGGACTT
CTACAAGGTGCCCTTCACCCAGGTGCTCGATCTGGTGCGCGGACGTCGCT
GCTTTTTAAAGGCTGGCTACGCCTATGTTAACACCCACGACCTGGTGTCC
CTAGTGGGCACCAAGCAGCAGGACGAGATCGAGCAAGGCCTGCAGGCTGC
TAAGACTATGGTGGAGGATGTAGAAGCCGACGAGCGCATCTCCCGCACAC
TTAAAGCTCTACATAACTCGTATACCGGTAGGGATTACACCGTTTGTCGG
GATGCAGCGGTGCCCATCGAGTCGCTCGATCAGCTCTCCAAGACCTCCAT
GCCGTTGTGTATGCGCATGTGCCACGAGCACATTCGTGCCAACCATCACA
TAAAACATAGCGGCCGAATGCAATACGGCCTGTTTCTCAAAGGAATTGGC
GTGGCACTGGAGGATTCGCTGCGCTTCTGGCGCGAAGAGTTTACCAAGAA
AATGGACGCGGATAAGTTTACACGCAGCTACGAGTACAATATTTACCATA
ACTACGGAAAGAAGGGTTCCATGGTCAACTACACACCCTACTCGTGCGCC
AAGATTATCAAGGATGTGGCGGGGCCGGGCGATTGCCACGGCTGTCCGTA
TAAGAACATGGATCAGGGCTCGTTGAAAACCAAGCTGTCCTCCTATGGCC
TGTCAGCCAGTGCCATCGACGAGGTGATGTTCTTTGTGTCCCGCGGTCAC
TATCAAATTGGATGCGGCAAGTACTTCCAACTTACCCACAATTCACCCGT
CGAGCCGAGCATCAATCACCCCAACAACTACTTCGAGGAGAGCCAGATAG
CGATGGGCAACCGGCAGAAGCGCGCCAATGGTTCTGCTCCGCCCAAGGCC
AGAATCCGTCCAGATATCAAGGGCCATGGGGATCGGTCCATGCTGATGGG
TGACGATGACGATGAGTTGTGGCGAATCGCGGAAACCCAGGAGCGTATCA
TGCAGAGCCAAAAGGACATATCCGAGGCCTTCAATGATGATCTAGATCTT
ACGCAAATCGATTACTAAAAGCTTTCTAGACCAT
BS32563.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:59:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DNApol-alpha60-RA | 1602 | CG5553-PA | 1..1602 | 17..1618 | 7995 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:59:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DNApol-alpha60-RA | 1753 | CG5553-RA | 79..1681 | 17..1619 | 8000 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:59:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20359905..20361507 | 1619..17 | 8000 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:59:12 has no hits.
BS32563.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:21 Download gff for
BS32563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNApol-alpha60-RA | 79..1678 | 17..1616 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:58 Download gff for
BS32563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNApol-alpha60-RA | 79..1678 | 17..1616 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:58 Download gff for
BS32563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20359908..20361507 | 17..1616 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:21 Download gff for
BS32563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20353008..20354607 | 17..1616 | 99 | | Minus |
BS32563.pep Sequence
Translation from 16 to 1617
> BS32563.pep
MEFGLKKRARHEVKVEVASLETKYPHNVMLYHYPPTEDVHIDEFEELALE
RLRLLRVLDRASTRNLRVLSDEWKEIVSADLTREGLRSYLRLCSTGGSAK
HEADIQTRRRDYLSHFILRLAYCRSEDLARWFVAREMELFRYKFAALSSF
EVKQFLEANGFEIHPLTEAQKDEVKDGLYESTVGQSVAKIELLDFYKVPF
TQVLDLVRGRRCFLKAGYAYVNTHDLVSLVGTKQQDEIEQGLQAAKTMVE
DVEADERISRTLKALHNSYTGRDYTVCRDAAVPIESLDQLSKTSMPLCMR
MCHEHIRANHHIKHSGRMQYGLFLKGIGVALEDSLRFWREEFTKKMDADK
FTRSYEYNIYHNYGKKGSMVNYTPYSCAKIIKDVAGPGDCHGCPYKNMDQ
GSLKTKLSSYGLSASAIDEVMFFVSRGHYQIGCGKYFQLTHNSPVEPSIN
HPNNYFEESQIAMGNRQKRANGSAPPKARIRPDIKGHGDRSMLMGDDDDE
LWRIAETQERIMQSQKDISEAFNDDLDLTQIDY*
BS32563.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DNApol-alpha60-PA | 533 | CG5553-PA | 1..533 | 1..533 | 2803 | 100 | Plus |