BS32567.complete Sequence
515 bp assembled on 2013-09-16
GenBank Submission: KX803665
> BS32567.complete
GAAGTTATCAGTCGACATGAGTTCTATCGAGTGGATCGCTGATATGCTTT
TCTACGCTATGCGCACCTACCTCAAGATGACCGCACCCAGTTGCGATGCA
CACTTCCTTATCAATGCCCTTGGAAAGATTGAACATCTTATACATTTCAT
TGAATTTTCCATTATGATAATACGGCGGCCAAGAAATCTCATGGTTTTGA
CTAATAGCCGAGAGAGCCGCCTTCAACTCCGCAATTGCCTTTCAATGTTA
AGGACTTGGGCACAAGTGATATACGCATTGCTATCCGTGCTTGCTTTAAT
CCATATCAAAACGATTTACATTAGTATCGCGCTGTTGATTTCCGGCATCG
TCTTGTTCACTGATATGATCTTCATGGCAATAAATGGCGTACATGGCAGG
AGAACGCTGCGACCCGCGCAGATTCTATGGATTTCGTTGTGTTGTTGCAC
TTGGGTGCCATGGATCCTGGACGAAATGATCAACTATTTGTATAAATGAA
AGCTTTCTAGACCAT
BS32567.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:59:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43076-RA | 483 | CG43076-PA | 1..483 | 17..499 | 2415 | 100 | Plus |
| CG42766-RA | 297 | CG42766-PA | 11..288 | 27..304 | 370 | 75.5 | Plus |
| CG42766-RB | 297 | CG42766-PB | 11..273 | 27..289 | 325 | 74.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:59:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43076-RA | 771 | CG43076-RA | 100..582 | 17..499 | 2415 | 100 | Plus |
| CG42766-RA | 626 | CG42766-RA | 126..403 | 27..304 | 370 | 75.5 | Plus |
| CG42766-RB | 732 | CG42766-RB | 126..388 | 27..289 | 325 | 74.9 | Plus |
| CG42766-RA | 626 | CG42766-RA | 431..524 | 406..499 | 200 | 80.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:59:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15222846..15223056 | 499..289 | 1055 | 100 | Minus |
| X | 23542271 | X | 15223149..15223312 | 289..126 | 820 | 100 | Minus |
| X | 23542271 | X | 15223373..15223483 | 127..17 | 555 | 100 | Minus |
| X | 23542271 | X | 15977465..15977558 | 406..499 | 200 | 80.9 | Plus |
| X | 23542271 | X | 15977179..15977316 | 152..289 | 180 | 75.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:59:32 has no hits.
BS32567.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:29 Download gff for
BS32567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43076-RA | 16..497 | 17..498 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:06 Download gff for
BS32567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43076-RA | 100..581 | 17..498 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:06 Download gff for
BS32567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15222847..15223055 | 290..498 | 100 | <- | Minus |
| X | 15223149..15223310 | 128..289 | 100 | <- | Minus |
| X | 15223373..15223483 | 17..127 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:29 Download gff for
BS32567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15117406..15117516 | 17..127 | 100 | | Minus |
| arm_X | 15116880..15117088 | 290..498 | 100 | <- | Minus |
| arm_X | 15117182..15117343 | 128..289 | 100 | <- | Minus |
BS32567.pep Sequence
Translation from 16 to 498
> BS32567.pep
MSSIEWIADMLFYAMRTYLKMTAPSCDAHFLINALGKIEHLIHFIEFSIM
IIRRPRNLMVLTNSRESRLQLRNCLSMLRTWAQVIYALLSVLALIHIKTI
YISIALLISGIVLFTDMIFMAINGVHGRRTLRPAQILWISLCCCTWVPWI
LDEMINYLYK*
BS32567.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:45:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43076-PA | 160 | CG43076-PA | 1..160 | 1..160 | 831 | 100 | Plus |
| CG42766-PA | 98 | CG42766-PA | 1..98 | 1..98 | 248 | 51 | Plus |
| CG42766-PB | 98 | CG42766-PB | 1..92 | 1..92 | 223 | 50 | Plus |
| CG43075-PA | 174 | CG43075-PA | 1..174 | 1..157 | 153 | 26.7 | Plus |
