BS32569.complete Sequence
443 bp assembled on 2013-10-14
GenBank Submission: KX805808
> BS32569.complete
GAAGTTATCAGTCGACATGTGCTCTATGTCAGACTACGGAGCACGCCCCA
AAAAACCCATGAGCGCCTTCATGTTGTGGATGAATTCCACCGGGCGCAAG
AACATAAGAGCGGAGCATCCCGATTTTAGTGTCCAAGAAGTGTCTGTGAA
GGGCGGTGAGATGTGGCGAGCCATGGCCGATGAGCACAAGATCGTGTGGC
AGGAGTCGGCCAGCAAGGCAATGGCCGAGTACAAGGAGAAGTTGGAGAAG
TGGAATGCCTTCAAGGAGCACCAGACGGAGTCGTTTCCCCATATCTATGA
AGCTCCGTTGTCCTCTCGATTCTCAAAAACTAACCAAAGGCCAACCCTTT
TTGTGTACGACAGCAAGGATGAAGCAATGGCTCCGATCTGCAGGACGTGC
TTCTCAAAGGCCAAGTGCTTTCACTAAAAGCTTTCTAGACCAT
BS32569.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:08:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7046-RB | 405 | CG7046-PB | 4..405 | 26..427 | 2010 | 100 | Plus |
CG7046-RA | 402 | CG7046-PA | 1..402 | 26..427 | 2010 | 100 | Plus |
CG7045-RA | 381 | CG7045-PA | 1..247 | 26..272 | 1010 | 93.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:08:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7046-RB | 550 | CG7046-RB | 67..469 | 26..428 | 2015 | 100 | Plus |
CG7046-RA | 588 | CG7046-RA | 105..507 | 26..428 | 2015 | 100 | Plus |
CG7045-RA | 553 | CG7045-RA | 99..345 | 26..272 | 1010 | 93.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:08:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22493263..22493665 | 26..428 | 2015 | 100 | Plus |
3R | 32079331 | 3R | 22491927..22492173 | 26..272 | 1010 | 93.9 | Plus |
3R | 32079331 | 3R | 22492202..22492307 | 322..427 | 305 | 85.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:08:09 has no hits.
BS32569.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 13:27:10 Download gff for
BS32569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7046-RA | 105..504 | 26..425 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:56 Download gff for
BS32569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7046-RA | 105..504 | 26..425 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:56 Download gff for
BS32569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22493263..22493662 | 26..425 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 13:27:10 Download gff for
BS32569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18318985..18319384 | 26..425 | 100 | | Plus |
BS32569.pep Sequence
Translation from 16 to 426
> BS32569.pep
MCSMSDYGARPKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMW
RAMADEHKIVWQESASKAMAEYKEKLEKWNAFKEHQTESFPHIYEAPLSS
RFSKTNQRPTLFVYDSKDEAMAPICRTCFSKAKCFH*
BS32569.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7046-PA | 133 | CG7046-PA | 1..133 | 4..136 | 720 | 100 | Plus |
CG7046-PB | 134 | CG7046-PB | 2..134 | 4..136 | 720 | 100 | Plus |
CG7045-PA | 126 | CG7045-PA | 1..126 | 4..136 | 491 | 71.4 | Plus |
HmgD-PD | 112 | CG17950-PD | 1..72 | 4..81 | 169 | 44.9 | Plus |
HmgD-PC | 112 | CG17950-PC | 1..72 | 4..81 | 169 | 44.9 | Plus |