Clone BS32569 Report

Search the DGRC for BS32569

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG7046-RA
Protein status:BS32569.pep: gold
Sequenced Size:443

Clone Sequence Records

BS32569.complete Sequence

443 bp assembled on 2013-10-14

GenBank Submission: KX805808

> BS32569.complete
GAAGTTATCAGTCGACATGTGCTCTATGTCAGACTACGGAGCACGCCCCA
AAAAACCCATGAGCGCCTTCATGTTGTGGATGAATTCCACCGGGCGCAAG
AACATAAGAGCGGAGCATCCCGATTTTAGTGTCCAAGAAGTGTCTGTGAA
GGGCGGTGAGATGTGGCGAGCCATGGCCGATGAGCACAAGATCGTGTGGC
AGGAGTCGGCCAGCAAGGCAATGGCCGAGTACAAGGAGAAGTTGGAGAAG
TGGAATGCCTTCAAGGAGCACCAGACGGAGTCGTTTCCCCATATCTATGA
AGCTCCGTTGTCCTCTCGATTCTCAAAAACTAACCAAAGGCCAACCCTTT
TTGTGTACGACAGCAAGGATGAAGCAATGGCTCCGATCTGCAGGACGTGC
TTCTCAAAGGCCAAGTGCTTTCACTAAAAGCTTTCTAGACCAT

BS32569.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:08:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG7046-RB 405 CG7046-PB 4..405 26..427 2010 100 Plus
CG7046-RA 402 CG7046-PA 1..402 26..427 2010 100 Plus
CG7045-RA 381 CG7045-PA 1..247 26..272 1010 93.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:08:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG7046-RB 550 CG7046-RB 67..469 26..428 2015 100 Plus
CG7046-RA 588 CG7046-RA 105..507 26..428 2015 100 Plus
CG7045-RA 553 CG7045-RA 99..345 26..272 1010 93.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22493263..22493665 26..428 2015 100 Plus
3R 32079331 3R 22491927..22492173 26..272 1010 93.9 Plus
3R 32079331 3R 22492202..22492307 322..427 305 85.8 Plus
Blast to na_te.dros performed on 2014-11-28 14:08:09 has no hits.

BS32569.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 13:27:10 Download gff for BS32569.complete
Subject Subject Range Query Range Percent Splice Strand
CG7046-RA 105..504 26..425 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:56 Download gff for BS32569.complete
Subject Subject Range Query Range Percent Splice Strand
CG7046-RA 105..504 26..425 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:56 Download gff for BS32569.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22493263..22493662 26..425 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 13:27:10 Download gff for BS32569.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18318985..18319384 26..425 100   Plus

BS32569.pep Sequence

Translation from 16 to 426

> BS32569.pep
MCSMSDYGARPKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMW
RAMADEHKIVWQESASKAMAEYKEKLEKWNAFKEHQTESFPHIYEAPLSS
RFSKTNQRPTLFVYDSKDEAMAPICRTCFSKAKCFH*

BS32569.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG7046-PA 133 CG7046-PA 1..133 4..136 720 100 Plus
CG7046-PB 134 CG7046-PB 2..134 4..136 720 100 Plus
CG7045-PA 126 CG7045-PA 1..126 4..136 491 71.4 Plus
HmgD-PD 112 CG17950-PD 1..72 4..81 169 44.9 Plus
HmgD-PC 112 CG17950-PC 1..72 4..81 169 44.9 Plus