Clone BS32570 Report

Search the DGRC for BS32570

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:70
Vector:pDNR-Dual
Associated Gene/TranscriptCG12661-RA
Protein status:BS32570.pep: full length peptide match
Sequenced Size:428

Clone Sequence Records

BS32570.complete Sequence

428 bp assembled on 2013-09-16

GenBank Submission: KX801249

> BS32570.complete
GAAGTTATCAGTCGACATGGATTGTGACAATTCGAGTTTGGAGGAGAAGC
GAGAACGCGTTGACAATGCAATCCTAACCGCCATGGAGGATCTGGATCGG
GATTATCTGCGCAAATTGCAGATCGAGATGCACAGATGTGCGACCGCCTG
TTGTGCGGATGCGGACGCGAATGCGGAGGCGGTGGAGCGGTGCATCGATC
GCTGCCAAATCCGTTTGACCCGATCACGCTGCTTCGTACAGCAGGGTATA
TCCGATTTTGAGAATCGCCTAGAGAAGTGCATCCAGCAGTGCCGCCTCAA
TGGATCCGATTATAGCTTGGAACGTTGCACCAGCAACTGCGTGGATAGCC
ATGTGGGATTGTTGCCCGAAATGTTTAGGGCTATGCGAGATACCCTGGAG
AAAGGTGTTTAGAAGCTTTCTAGACCAT

BS32570.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG12661-RB 396 CG12661-PB 1..396 17..412 1980 100 Plus
CG12661-RA 396 CG12661-PA 1..396 17..412 1980 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:55:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG12661-RB 800 CG12661-RB 65..465 12..412 1990 99.8 Plus
CG12661-RA 517 CG12661-RA 65..465 12..412 1990 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:55:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8923223..8923623 412..12 1990 99.8 Minus
Blast to na_te.dros performed on 2014-11-28 13:55:23 has no hits.

BS32570.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:01:51 Download gff for BS32570.complete
Subject Subject Range Query Range Percent Splice Strand
CG12661-RA 70..465 17..412 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:35 Download gff for BS32570.complete
Subject Subject Range Query Range Percent Splice Strand
CG12661-RA 70..465 17..412 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:35 Download gff for BS32570.complete
Subject Subject Range Query Range Percent Splice Strand
X 8923223..8923618 17..412 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:01:51 Download gff for BS32570.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8817256..8817651 17..412 100   Minus

BS32570.pep Sequence

Translation from 16 to 411

> BS32570.pep
MDCDNSSLEEKRERVDNAILTAMEDLDRDYLRKLQIEMHRCATACCADAD
ANAEAVERCIDRCQIRLTRSRCFVQQGISDFENRLEKCIQQCRLNGSDYS
LERCTSNCVDSHVGLLPEMFRAMRDTLEKGV*

BS32570.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG12661-PB 131 CG12661-PB 1..131 1..131 695 100 Plus
CG12661-PA 131 CG12661-PA 1..131 1..131 695 100 Plus
CG5323-PA 146 CG5323-PA 2..139 8..130 287 34.8 Plus
CG5327-PA 149 CG5327-PA 2..139 8..130 260 32.6 Plus