Clone BS32574 Report

Search the DGRC for BS32574

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG13965-RA
Protein status:BS32574.pep: gold
Sequenced Size:434

Clone Sequence Records

BS32574.complete Sequence

434 bp assembled on 2013-09-16

GenBank Submission: KX800951

> BS32574.complete
GAAGTTATCAGTCGACATGGCGAAACTTGAACTGAAGCTGATTGGAATCG
CTATATTCTTGGTAGCCGCGCTCGAGGCTCAGGAAACCCCTGCGGCTGAA
TCATCTCCAGCGTCCCCAACAGATGGCGAAACGTCTCCAGTTACAGAAGC
CAGTTCCATCGGAGAATTAACTCAGACCACAGAAGCGGGGTCGGAGGTCA
CAGAATCACCAACAAATAGCACCGATATGGTTAATAGCACGGACAACCCA
GACCCGAACGGCTCGCCTGACCCTGAAAATGGAGGAGATCCATTTGTGAA
GCCAGGAAGCCATATAAAGGGACCTCGACACGTTAGAGCACATGATGGCT
TCCACAGCCTGAAGACGGAGAAGCATTGGGCAAGCTGGAACGATGCCTTT
ACCACGCCACGTCCCTAGAAGCTTTCTAGACCAT

BS32574.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:59:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG13965-RA 402 CG13965-PA 1..402 17..418 2010 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:59:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG13965-RA 535 CG13965-RA 54..456 16..418 2015 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:59:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19961837..19962215 418..40 1895 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:59:47 has no hits.

BS32574.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:33 Download gff for BS32574.complete
Subject Subject Range Query Range Percent Splice Strand
CG13965-RA 55..456 17..418 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:11 Download gff for BS32574.complete
Subject Subject Range Query Range Percent Splice Strand
CG13965-RA 55..456 17..418 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:11 Download gff for BS32574.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19961837..19962214 41..418 100 <- Minus
2L 19962275..19962298 17..40 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:33 Download gff for BS32574.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19961837..19962214 41..418 100 <- Minus
arm_2L 19962275..19962298 17..40 100   Minus

BS32574.pep Sequence

Translation from 16 to 417

> BS32574.pep
MAKLELKLIGIAIFLVAALEAQETPAAESSPASPTDGETSPVTEASSIGE
LTQTTEAGSEVTESPTNSTDMVNSTDNPDPNGSPDPENGGDPFVKPGSHI
KGPRHVRAHDGFHSLKTEKHWASWNDAFTTPRP*

BS32574.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:45:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG13965-PA 133 CG13965-PA 1..133 1..133 703 100 Plus