BS32575.complete Sequence
386 bp assembled on 2013-09-16
GenBank Submission: KX801655
> BS32575.complete
GAAGTTATCAGTCGACATGAACGCACCACCTACCTTTGAGTCATTTCTGC
TCTATGAAGGCGAGAAAAAAATCATCAAGGAACTGGACACCAAAGTGACC
AATGCGGCTATATTCACCATAAACAAAGAGGATCACACGCTGGGCAACAT
GATCCGCAACCAACTGCTGAAGGATCCCAATGTTCTGTTTGCCGGCTACA
AGGTTCCGCATCCTCTGGAGCACAAGTTCGTCATCCGCATCCAGACTACG
GCCGATTATTCTCCGCAGGAAGCATTCATGAACGCCATAACCGATCTTCT
AGCAGAATTATCTCTCTTCGAAGAGCGTTTCAAAGACGCCATCAAGGAGA
AGAAGGAGGGCGGCGATTAAAAGCTTTCTAGACCAT
BS32575.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:59:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rpb11-RA | 354 | CG6840-PA | 1..354 | 17..370 | 1770 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:59:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rpb11-RA | 516 | CG6840-RA | 103..456 | 17..370 | 1770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:59:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17409855..17410034 | 335..156 | 885 | 99.4 | Minus |
| 2L | 23513712 | 2L | 17410088..17410177 | 159..70 | 450 | 100 | Minus |
| 2L | 23513712 | 2L | 17410252..17410304 | 69..17 | 265 | 100 | Minus |
| 2L | 23513712 | 2L | 17409758..17409793 | 370..335 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:59:52 has no hits.
BS32575.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:34 Download gff for
BS32575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpb11-RA | 103..454 | 17..368 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:12 Download gff for
BS32575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpb11-RA | 103..454 | 17..368 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:12 Download gff for
BS32575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17410088..17410177 | 70..159 | 100 | <- | Minus |
| 2L | 17410252..17410304 | 17..69 | 100 | | Minus |
| 2L | 17409760..17409793 | 335..368 | 100 | <- | Minus |
| 2L | 17409856..17410030 | 160..334 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:34 Download gff for
BS32575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17409760..17409793 | 335..368 | 100 | <- | Minus |
| arm_2L | 17409856..17410030 | 160..334 | 100 | <- | Minus |
| arm_2L | 17410088..17410177 | 70..159 | 100 | <- | Minus |
| arm_2L | 17410252..17410304 | 17..69 | 100 | | Minus |
BS32575.pep Sequence
Translation from 16 to 369
> BS32575.pep
MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQL
LKDPNVLFAGYKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSL
FEERFKDAIKEKKEGGD*
BS32575.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:45:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rpb11-PA | 117 | CG6840-PA | 1..117 | 1..117 | 602 | 100 | Plus |
