Clone BS32576 Report

Search the DGRC for BS32576

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:76
Vector:pDNR-Dual
Associated Gene/TranscriptGrx-1-RA
Protein status:BS32576.pep: full length peptide match
Sequenced Size:383

Clone Sequence Records

BS32576.complete Sequence

383 bp assembled on 2013-09-16

GenBank Submission: KX804781

> BS32576.complete
GAAGTTATCAGTCGACATGGGTACGGTGGTCAGCACCCTGCAGCGACCCA
CTCTCTACGTGAGCATGGACAGCTCGCATGCGCAGTTCGTGCGGGACACA
ATCAGCGGCAACAAGGTGGTGATCTTTAGCAAGAGCTACTGCCCCTACTG
CAGCATGGCCAAGGAACAGTTCCGAAAGATCAACGTCAAGGCAACGGTGA
TTGAGCTGGACCAGCGGGATGATGGCAACGAGATCCAGGCGGTTCTTGGC
GAGATGACGGGCTCGAGGACCGTTCCACGTTGCTTCATCGATGGCAAGTT
CGTGGGTGGCGGCACCGACGTGAAGCGGCTATACGAACAGGGCATACTGC
AGAAGTATTTTCAGTGAAAGCTTTCTAGACCAT

BS32576.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:59:58
Subject Length Description Subject Range Query Range Score Percent Strand
Grx-1-RA 351 CG7975-PA 1..351 17..367 1755 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:59:59
Subject Length Description Subject Range Query Range Score Percent Strand
Grx-1-RA 569 CG7975-RA 146..499 16..369 1770 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:59:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21757490..21757843 16..369 1770 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:59:57 has no hits.

BS32576.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:37 Download gff for BS32576.complete
Subject Subject Range Query Range Percent Splice Strand
Grx-1-RA 147..496 17..366 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:13 Download gff for BS32576.complete
Subject Subject Range Query Range Percent Splice Strand
Grx-1-RA 147..496 17..366 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:13 Download gff for BS32576.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21757491..21757840 17..366 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:37 Download gff for BS32576.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17644996..17645345 17..366 100   Plus

BS32576.pep Sequence

Translation from 16 to 366

> BS32576.pep
MGTVVSTLQRPTLYVSMDSSHAQFVRDTISGNKVVIFSKSYCPYCSMAKE
QFRKINVKATVIELDQRDDGNEIQAVLGEMTGSRTVPRCFIDGKFVGGGT
DVKRLYEQGILQKYFQ*

BS32576.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:45:09
Subject Length Description Subject Range Query Range Score Percent Strand
Grx-1-PA 116 CG7975-PA 1..116 1..116 599 100 Plus
CG6852-PC 114 CG6852-PC 1..114 1..116 415 68.1 Plus
CG6852-PA 114 CG6852-PA 1..114 1..116 415 68.1 Plus