Clone BS32582 Report

Search the DGRC for BS32582

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG16956-RA
Protein status:BS32582.pep: gold
Sequenced Size:671

Clone Sequence Records

BS32582.complete Sequence

671 bp assembled on 2013-10-14

GenBank Submission: KX800239

> BS32582.complete
GAAGTTATCAGTCGACATGTGGAACAAACCGTATATGGGAATAATAATTT
TGTGTATGCTAGCCAGCGGTGGAAGAGCCGTACCCACCGATTTGGCCAGA
TACTCTCAGTTGGGACAAGTACCGTTGACGGCAGCCAACAACAGCGTGGT
GTCCACCACTGATCATTTGGGTCTCCTGCAGGAGACGTCCTCGGTAGCTC
CTGACTTCGAATACTCACTACTGGGCGAGGATCCGCAGGATCAGCAATGG
TTTCGCGTCAGTCTTACTCCGAAAACCAACAAAACTGGCTACCGCGCACA
GTTTGCCACTCGAAAACATCCGCCCTTTAATTCGCAAGTGGCCCACCGGC
ATGATAAAACTATTCAGGATCTGCTTAACTGGCTGGACCGTTCCGAGGAT
CAGAGTTTGTGGAAAGTTTATCGTGATCTCTTGGAGTACACACCACAGGC
ACAGTCATCCAGCCAGGAGTATCCTAATGGCAACGTAATCGAAAAAGCGA
AGAAGTCGTCCCAGAAGCAGAAATGTCATAGGCGCAATCACCGACTGCTC
CTGGTGGATGAAGATGGAACCAGTACCACGACATCATTACCACCAAGTAA
GGACCAAACGCAACCGACACATGAGTTGGTTTATTTCATAAGGGAGCCTA
AGTAAAAGCTTTCTAGACCAT

BS32582.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:08:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG16956-RA 600 CG16956-PA 1..600 56..655 3000 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:08:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG16956-RA 737 CG16956-RA 21..659 17..655 3195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13413861..13414402 655..114 2710 100 Minus
2L 23513712 2L 13414458..13414555 114..17 490 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:07:59 has no hits.

BS32582.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:30:15 Download gff for BS32582.complete
Subject Subject Range Query Range Percent Splice Strand
CG16956-RA 21..657 17..653 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:53 Download gff for BS32582.complete
Subject Subject Range Query Range Percent Splice Strand
CG16956-RA 21..657 17..653 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:53 Download gff for BS32582.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13413863..13414401 115..653 100 <- Minus
2L 13414458..13414555 17..114 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:30:15 Download gff for BS32582.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13413863..13414401 115..653 100 <- Minus
arm_2L 13414458..13414555 17..114 100   Minus

BS32582.pep Sequence

Translation from 16 to 654

> BS32582.pep
MWNKPYMGIIILCMLASGGRAVPTDLARYSQLGQVPLTAANNSVVSTTDH
LGLLQETSSVAPDFEYSLLGEDPQDQQWFRVSLTPKTNKTGYRAQFATRK
HPPFNSQVAHRHDKTIQDLLNWLDRSEDQSLWKVYRDLLEYTPQAQSSSQ
EYPNGNVIEKAKKSSQKQKCHRRNHRLLLVDEDGTSTTTSLPPSKDQTQP
THELVYFIREPK*

BS32582.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG16956-PA 199 CG16956-PA 1..199 14..212 1047 100 Plus