BS32582.complete Sequence
671 bp assembled on 2013-10-14
GenBank Submission: KX800239
> BS32582.complete
GAAGTTATCAGTCGACATGTGGAACAAACCGTATATGGGAATAATAATTT
TGTGTATGCTAGCCAGCGGTGGAAGAGCCGTACCCACCGATTTGGCCAGA
TACTCTCAGTTGGGACAAGTACCGTTGACGGCAGCCAACAACAGCGTGGT
GTCCACCACTGATCATTTGGGTCTCCTGCAGGAGACGTCCTCGGTAGCTC
CTGACTTCGAATACTCACTACTGGGCGAGGATCCGCAGGATCAGCAATGG
TTTCGCGTCAGTCTTACTCCGAAAACCAACAAAACTGGCTACCGCGCACA
GTTTGCCACTCGAAAACATCCGCCCTTTAATTCGCAAGTGGCCCACCGGC
ATGATAAAACTATTCAGGATCTGCTTAACTGGCTGGACCGTTCCGAGGAT
CAGAGTTTGTGGAAAGTTTATCGTGATCTCTTGGAGTACACACCACAGGC
ACAGTCATCCAGCCAGGAGTATCCTAATGGCAACGTAATCGAAAAAGCGA
AGAAGTCGTCCCAGAAGCAGAAATGTCATAGGCGCAATCACCGACTGCTC
CTGGTGGATGAAGATGGAACCAGTACCACGACATCATTACCACCAAGTAA
GGACCAAACGCAACCGACACATGAGTTGGTTTATTTCATAAGGGAGCCTA
AGTAAAAGCTTTCTAGACCAT
BS32582.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:08:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16956-RA | 600 | CG16956-PA | 1..600 | 56..655 | 3000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:08:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16956-RA | 737 | CG16956-RA | 21..659 | 17..655 | 3195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:07:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13413861..13414402 | 655..114 | 2710 | 100 | Minus |
2L | 23513712 | 2L | 13414458..13414555 | 114..17 | 490 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:07:59 has no hits.
BS32582.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:30:15 Download gff for
BS32582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16956-RA | 21..657 | 17..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:53 Download gff for
BS32582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16956-RA | 21..657 | 17..653 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:53 Download gff for
BS32582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13413863..13414401 | 115..653 | 100 | <- | Minus |
2L | 13414458..13414555 | 17..114 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:30:15 Download gff for
BS32582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13413863..13414401 | 115..653 | 100 | <- | Minus |
arm_2L | 13414458..13414555 | 17..114 | 100 | | Minus |
BS32582.pep Sequence
Translation from 16 to 654
> BS32582.pep
MWNKPYMGIIILCMLASGGRAVPTDLARYSQLGQVPLTAANNSVVSTTDH
LGLLQETSSVAPDFEYSLLGEDPQDQQWFRVSLTPKTNKTGYRAQFATRK
HPPFNSQVAHRHDKTIQDLLNWLDRSEDQSLWKVYRDLLEYTPQAQSSSQ
EYPNGNVIEKAKKSSQKQKCHRRNHRLLLVDEDGTSTTTSLPPSKDQTQP
THELVYFIREPK*
BS32582.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16956-PA | 199 | CG16956-PA | 1..199 | 14..212 | 1047 | 100 | Plus |