BS32583.complete Sequence
233 bp assembled on 2013-09-16
GenBank Submission: KX806074
> BS32583.complete
GAAGTTATCAGTCGACATGTTGATAGCCCGACTGGCGTTTTTAGTCTCTA
TTCTGGGCATTGTGGTTGGGTTCCAGAAACTGGACTCCACTTCCAGTCCC
ACGACTACCAGCACTATGAGGTCTGCCCCTTATTGTCAGCCAAGTGGAGG
ATATTGTCGGATGCATATGGATTGCTGTTCGCGAATGTGCATTCAAGTGT
CAGCAGAGTGTCGCTAGAAGCTTTCTAGACCAT
BS32583.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:59:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42869-RB | 201 | CG42869-PB | 1..201 | 17..217 | 1005 | 100 | Plus |
| CG43618-RA | 171 | CG43618-PA | 34..171 | 80..217 | 585 | 94.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:59:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42869-RB | 283 | CG42869-RB | 26..228 | 17..219 | 1015 | 100 | Plus |
| CG43618-RA | 225 | CG43618-RA | 43..182 | 80..219 | 595 | 95 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:59:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21736687..21736824 | 154..17 | 690 | 100 | Minus |
| 3R | 32079331 | 3R | 21736568..21736636 | 219..151 | 330 | 98.6 | Minus |
| 3R | 32079331 | 3R | 8049209..8049283 | 80..154 | 315 | 94.7 | Plus |
| 3R | 32079331 | 3R | 8049345..8049413 | 151..219 | 285 | 94.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:59:36 has no hits.
BS32583.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:30 Download gff for
BS32583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42869-RB | 31..226 | 22..217 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:08 Download gff for
BS32583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42869-RB | 31..226 | 22..217 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:08 Download gff for
BS32583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21736570..21736632 | 155..217 | 100 | <- | Minus |
| 3R | 21736687..21736819 | 22..154 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:30 Download gff for
BS32583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17562292..17562354 | 155..217 | 100 | <- | Minus |
| arm_3R | 17562409..17562541 | 22..154 | 100 | | Minus |
BS32583.pep Sequence
Translation from 16 to 216
> BS32583.pep
MLIARLAFLVSILGIVVGFQKLDSTSSPTTTSTMRSAPYCQPSGGYCRMH
MDCCSRMCIQVSAECR*
BS32583.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:45:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42869-PB | 66 | CG42869-PB | 1..66 | 1..66 | 349 | 100 | Plus |
| CG43618-PA | 56 | CG43618-PA | 2..56 | 9..66 | 253 | 81 | Plus |
