BS32585.complete Sequence
2081 bp assembled on 2013-11-09
GenBank Submission: KX800493
> BS32585.complete
GAAGTTATCAGTCGACATGGCGAATAGATTAGGAAACCATGAAGTTACCC
GCACCGCACGTGAAGTGCAGCAAAACTTTGCCGAGTCGCTCGGCTACGCG
GAAGAGATAATCTGGGATCTGTTGTCCCATGAACAACATGACGTGCTAAG
GGGCAAACTCTGTCAATTGATTCGTGATTCTCCGGAACCGAAAACTGCAA
CGGAAACTGAAAAAGACAGAAAAATCCGGCTGAAGGTCAACGCAGATAAT
GAGCGCGCCCGTCAGATCATTTTCGATTCCGTTTGGCAGCAACGAAAGTA
TACCAACCGTCAATCGCTGACGGCGATCATTTACGTAATGGTGGTAACTG
ACGAAACGGACGTCAATCGCGCCGAGGACGCCAGAGTCTTCAGCGTGCAC
CCAGTCTTTCGGGCCCGTCGATGCGTCGTTGGCAGTAGTGGCACCAGCAG
CGTCAGCTCGAATTGCTGCAATCTGTTTATCGACGAGCTTGGTCGGGTCT
ACCAAAACTGGGAGATGTATGTGACCACCAACGAGTTGCCTGCCGGAGTG
ATGGTGGCCCCAGAGAAGGGTATTTACCGCTTGGTCAGGGATCAAGTACG
TCTGGATAAGTACACAACGCCGGCGGGCACGACCAACAGGAAGGTGCTGG
GCTACCTGGATACTGGGTCGGCAGTCGGAGGATTTTTTGCTGCCTGTGTG
CCCATTGCTGCCCTGCTAACGCTGCCCGTATCCGCTCCGCTGATGGGCGC
AGCGGGAGTAGTAGGTTTGGCCAGTGCTGGATACGCCGCATCGCGGTCTG
GCAGCAAGCTATTCGATCGCAGCCAACATGAGCAGTCTATCAATGTGACG
GACCGCGAAGCGCGTGGTCACTGGTTGGGCGTGGCTGGTGGCACTGTGGG
ATTGGCAGCGGCTGGGGCCACCACAGTCTTGACAACGGCCACAAATGCTG
GACGCGAGGTGGGAGCGATCACCCAACTGACTGTGAATAGCATGAACATA
TCCTCGATTGTGGTATCGGGCACTGGAGTTGCCAATGGTGTGCTGGATCT
GATATTGAAAGCAAAAGACGGTGACGAAATAGTTGCGATGGATGTTTTGC
AATTGTCCGCTTCGTTGGTGCTGCTCACGCACAGCGTCTACAACTTTAAA
TTGGCTTCGACCATAATTAATGAGACAAGCAATGCTAATATTGCCGACTA
TCGTAAAAACCTTTCTAATAGGCAGCGGCGAACCTTTGACAAGGCTGCCA
AGGAGACCGTTCGGATGCAAGGCAACACTCGCGGCAAACTGGACATTATA
CGCAACGTAAACGAAATTTCGCCACAAGAGTTTAATGATCTTTTTAAGAT
CAACAAAAACTTGAATCAGGAGGGCGTGCGATACTCATTCGCACCCGATG
GCAAAGGATTTTTACTAAATGGCGATGTGCAGACGACGGGTGCGGAATTG
CGAGCTAGTGTACAACATAACCAAGGAGGGAATGTCCTAGGCAAAGTTAG
TCAGCCCATTCCCGGTAGCCATGCGGGTTCTGGTCGCCTTCAACTGGGCG
GCGTTAATCAGGTTTCCCGTCTAATCGGACCGCTGCCCACATCCCATCCT
CGACAGGAACCCAGTACCTATGCCGCCGGCGTGTTCGCCTTGGAGCTAAG
CTCTGTGTTGGTGGGCGGTGTTGTTTTCGTACTGGAGAAATACGGAAAAA
TCATATTTGAGCACGTGATCAATGCTGAAAGTTTTGAGAGCCTAATCAAC
ATCATGGCCAATAAGCTTGATCCAAAAGTCTTTGACCATATAATGCTATT
GACCAGAGCCTTCATGGACACCATGCTGGAAGACCTCACCTCGGTGCTAA
AGTTCTTTATATCAACGGAATCCGTTCTTTACCGCATTTTGTTGTACATT
TTACGGAACTTCGAGGACGTGCAACTTTCGGTTATTGCGGATCACACTTG
TGAGATCGTAGAAGCCGTAAGGGTGTACTTCATGTCCCTGAATCCAAATG
CGTTCCCGGGTCTCCTTCAGAAGTGTCCGAAATGTATCGGCCACTTCAGC
GTTTGTCCCTTGTAAAAGCTTTCTAGACCAT
BS32585.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:34:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pst-RG | 2049 | CG8588-PG | 1..2049 | 17..2065 | 10245 | 100 | Plus |
| pst-RE | 2049 | CG8588-PE | 1..2049 | 17..2065 | 10245 | 100 | Plus |
| pst-RF | 2124 | CG8588-PF | 353..2124 | 294..2065 | 8860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:34:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pst-RG | 2404 | CG8588-RG | 93..2141 | 17..2065 | 10245 | 100 | Plus |
| pst-RE | 2551 | CG8588-RE | 240..2288 | 17..2065 | 10245 | 100 | Plus |
| pst-RF | 2479 | CG8588-RF | 445..2216 | 294..2065 | 8860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:34:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7357538..7358376 | 2065..1227 | 4195 | 100 | Minus |
| 3L | 28110227 | 3L | 7358851..7359390 | 967..428 | 2700 | 100 | Minus |
| 3L | 28110227 | 3L | 7359677..7359850 | 294..121 | 870 | 100 | Minus |
| 3L | 28110227 | 3L | 7358445..7358616 | 1228..1057 | 860 | 100 | Minus |
| 3L | 28110227 | 3L | 7359468..7359602 | 428..294 | 675 | 100 | Minus |
| 3L | 28110227 | 3L | 7359919..7360024 | 122..17 | 530 | 100 | Minus |
| 3L | 28110227 | 3L | 7358691..7358781 | 1057..967 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:34:30 has no hits.
BS32585.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-11-09 12:26:44 Download gff for
BS32585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pst-RE | 240..2286 | 17..2063 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:17:24 Download gff for
BS32585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pst-RE | 240..2286 | 17..2063 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:17:24 Download gff for
BS32585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7357540..7358375 | 1228..2063 | 100 | <- | Minus |
| 3L | 7358446..7358611 | 1062..1227 | 100 | <- | Minus |
| 3L | 7358687..7358780 | 968..1061 | 96 | <- | Minus |
| 3L | 7358851..7359389 | 429..967 | 100 | <- | Minus |
| 3L | 7359468..7359602 | 294..428 | 100 | <- | Minus |
| 3L | 7359678..7359850 | 121..293 | 100 | <- | Minus |
| 3L | 7359921..7360024 | 17..120 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-11-09 12:26:44 Download gff for
BS32585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7350640..7351475 | 1228..2063 | 100 | <- | Minus |
| arm_3L | 7351546..7351711 | 1062..1227 | 100 | <- | Minus |
| arm_3L | 7351787..7351880 | 968..1061 | 96 | <- | Minus |
| arm_3L | 7351951..7352489 | 429..967 | 100 | <- | Minus |
| arm_3L | 7352568..7352702 | 294..428 | 100 | <- | Minus |
| arm_3L | 7352778..7352950 | 121..293 | 100 | <- | Minus |
| arm_3L | 7353021..7353124 | 17..120 | 100 | | Minus |
BS32585.pep Sequence
Translation from 16 to 2064
> BS32585.pep
MANRLGNHEVTRTAREVQQNFAESLGYAEEIIWDLLSHEQHDVLRGKLCQ
LIRDSPEPKTATETEKDRKIRLKVNADNERARQIIFDSVWQQRKYTNRQS
LTAIIYVMVVTDETDVNRAEDARVFSVHPVFRARRCVVGSSGTSSVSSNC
CNLFIDELGRVYQNWEMYVTTNELPAGVMVAPEKGIYRLVRDQVRLDKYT
TPAGTTNRKVLGYLDTGSAVGGFFAACVPIAALLTLPVSAPLMGAAGVVG
LASAGYAASRSGSKLFDRSQHEQSINVTDREARGHWLGVAGGTVGLAAAG
ATTVLTTATNAGREVGAITQLTVNSMNISSIVVSGTGVANGVLDLILKAK
DGDEIVAMDVLQLSASLVLLTHSVYNFKLASTIINETSNANIADYRKNLS
NRQRRTFDKAAKETVRMQGNTRGKLDIIRNVNEISPQEFNDLFKINKNLN
QEGVRYSFAPDGKGFLLNGDVQTTGAELRASVQHNQGGNVLGKVSQPIPG
SHAGSGRLQLGGVNQVSRLIGPLPTSHPRQEPSTYAAGVFALELSSVLVG
GVVFVLEKYGKIIFEHVINAESFESLINIMANKLDPKVFDHIMLLTRAFM
DTMLEDLTSVLKFFISTESVLYRILLYILRNFEDVQLSVIADHTCEIVEA
VRVYFMSLNPNAFPGLLQKCPKCIGHFSVCPL*
BS32585.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pst-PG | 682 | CG8588-PG | 1..682 | 1..682 | 3462 | 100 | Plus |
| pst-PE | 682 | CG8588-PE | 1..682 | 1..682 | 3462 | 100 | Plus |
| pst-PF | 707 | CG8588-PF | 1..707 | 1..682 | 3426 | 96.5 | Plus |
| CG7730-PC | 581 | CG7730-PC | 6..425 | 7..451 | 827 | 43 | Plus |
| CG32243-PA | 485 | CG32243-PA | 6..170 | 6..201 | 288 | 33.7 | Plus |
| CG7730-PC | 581 | CG7730-PC | 364..578 | 473..679 | 177 | 25 | Plus |
