BS32587.complete Sequence
1325 bp assembled on 2013-09-16
GenBank Submission: KX800241
> BS32587.complete
GAAGTTATCAGTCGACATGACTTCGCCCAAAAAGAAAGATAAGAATTCGA
ACGAGTTGGTTTGTAGCAGTGATTCCGAGCGGGAAAATGATGATCTGGCT
ATGCTGAAAATTGTTCTAAGGAAGCTAAATGTCAACGATCAGACGCTGCT
CCATCGCCATGTTGGCCATATACCGGATGCCCTTCATATGCTCTGGAGAT
TGCAACATCCACGTCTGAACTTTGAGTTAATGCAACGGAAGCTGCATGGA
TCCGATTTGGAATTGTTTCTACAGGAAATGATTACGGATATTCCCAGCAT
TAAATTTCGCAGTGAGAGCTTGCAGGACGAATTGAACATCCTGGAACGGG
CCAATATTAAACGTCTGCTGCACGTGAAATGTTGTACGATTACGTGGAAA
AATTCGACGAGCCAGAAGAATACCAAATTCCCTCATTGGCCATTTCTCGC
ACTGCCCAAATTGATGAGCAATCTGACCGATCTCGATATATACTGCCCAG
TGCAGGATTGCTTTATCGATCAGTTTGCCAAATTGGAAGCCCTGAAGATC
GCTGAAGAGATTTCTAAACCAGCCATGGACGCCATTTACTTAAGTGGCGC
ACCATTAAAGTGTTTGAATCTATCGGGTTCTCATACATATCCCACAAGTT
GCATCTCACACTGCAAATATCTGAGCAACTTATTCGTAAATCTGGACACT
TTTTTGGCCGGTCAAAATGAGATTCTCAAGCTGCCCAGTCTTACTGAACT
GAAAATCACTGAGATTCGAGAAAACAAGGACACAACGAAAGCCCTAGCCA
ATGTAGTGCAGACAAAAGGCAATGAACTTGTGGGCATTCAAATTAATTGC
ATCTTTGAGGATCATATCAAGTGCCTAAGTGATTTGACTTTAAATTGCTG
TATAAATCTGACGGAACTGCAGTTATCCAATTGCATATTTGCCTATCAGG
ATATAGTCAAGTTGTGTCTGCCCGTTGGCATAACCTTTGCTCGATTCACC
AACTGTCCAGATCTCACTGATGAACAGCTCTTGGACTTCATCAAGGCTAA
TGCCGAAATGGAAGAGCTTCTACTGGATCAGTGCCCAGAACTGACGGAAG
ATCTACTTCATGGTGTTCTTAAAGTGCGCAGTAGTGGTAATAAACAAGTG
CACTTGTTGCTCAGAATTGCGAAAAGTCCGAATCTTTGGGATACATATCA
ACAGAACTTAAAGTATTGGAAACGAAAGGAATCTATTCTTAAATTGGAAA
GTTTGGAGAGTTCTGCCTCGGAGGACATTGTGATGCACTTTGAAAATGAA
AATTTATAAAAGCTTTCTAGACCAT
BS32587.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:00:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14316-RA | 1293 | CG14316-PA | 1..1293 | 17..1309 | 6465 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:00:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14316-RA | 1468 | CG14316-RA | 96..1388 | 17..1309 | 6465 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:00:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18152215..18153409 | 17..1211 | 5960 | 99.9 | Plus |
| 3R | 32079331 | 3R | 18153459..18153560 | 1208..1309 | 510 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:00:25 has no hits.
BS32587.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:49 Download gff for
BS32587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14316-RA | 96..1386 | 17..1307 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:22 Download gff for
BS32587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14316-RA | 96..1386 | 17..1307 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:22 Download gff for
BS32587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18152215..18153405 | 17..1207 | 100 | -> | Plus |
| 3R | 18153459..18153558 | 1208..1307 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:49 Download gff for
BS32587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13977937..13979127 | 17..1207 | 100 | -> | Plus |
| arm_3R | 13979181..13979280 | 1208..1307 | 100 | | Plus |
BS32587.pep Sequence
Translation from 16 to 1308
> BS32587.pep
MTSPKKKDKNSNELVCSSDSERENDDLAMLKIVLRKLNVNDQTLLHRHVG
HIPDALHMLWRLQHPRLNFELMQRKLHGSDLELFLQEMITDIPSIKFRSE
SLQDELNILERANIKRLLHVKCCTITWKNSTSQKNTKFPHWPFLALPKLM
SNLTDLDIYCPVQDCFIDQFAKLEALKIAEEISKPAMDAIYLSGAPLKCL
NLSGSHTYPTSCISHCKYLSNLFVNLDTFLAGQNEILKLPSLTELKITEI
RENKDTTKALANVVQTKGNELVGIQINCIFEDHIKCLSDLTLNCCINLTE
LQLSNCIFAYQDIVKLCLPVGITFARFTNCPDLTDEQLLDFIKANAEMEE
LLLDQCPELTEDLLHGVLKVRSSGNKQVHLLLRIAKSPNLWDTYQQNLKY
WKRKESILKLESLESSASEDIVMHFENENL*
BS32587.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:45:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14316-PA | 430 | CG14316-PA | 1..430 | 1..430 | 2249 | 100 | Plus |
| CG31819-PA | 497 | CG31819-PA | 54..477 | 1..411 | 420 | 28.1 | Plus |
