BS32591.complete Sequence
836 bp assembled on 2013-09-16
GenBank Submission: KX805927
> BS32591.complete
GAAGTTATCAGTCGACATGAAACTGCTCGTATTCCTGGCTCTGGCCGTGG
CCGCAGCCACAGCCATTCCTACCCCAGAGCAAAAGTTGGTCCCCACCCCG
GTGAAGGATGTCAAGATCCAGGGTCGCATTACCAACGGCTACCCAGCCTA
CGAGGGCAAGGTTCCCTACATCGTGGGTCTGCTGTTCAGCGGCAATGGAA
ACTGGTGGTGCGGTGGCTCGATCATCGGAAACACCTGGGTCCTGACCGCC
GCCCACTGCACCAACGGAGCCAGTGGAGTGACCATCAACTACGGAGCCAG
TCTGCGCAACCAGCCCCAGTACACCCACTGGGTTGGAAGCGGAAACTTCG
TCCAGCACCACCACTACAACAGCGGCAACCTGCACAACGACATCTCCCTG
ATCCGTACCCCGCACGTCGACTTCTGGCACCTGGTCAACAAGGTGGAGCT
GCCCAGCTACAACGACCGCTACCAGGACTACGCCGGATGGTGGGCCGTGG
CCTCCGGATGGGGCGGCACCTACGATGGCAGCCCACTGCCCGACTGGCTC
CAGGCTGTCGATGTCCAGATCATGTCCCAGAGTGATTGCAGCCGCACTTG
GTCTCTCCACGACAACATGATTTGCATCAACACCAACGGCGGAAAGTCCA
CCTGCGGAGGTGACTCCGGTGGTCCCCTGGTGACACACGAGGGCAACCGC
CTGGTCGGAGTGACCTCCTTCGTTTCCTCCGCCGGCTGCCAGTCTGGTGC
TCCCGCTGTCTTCAGCCGTGTCACTGGATACTTGGACTGGATCCGCGACA
ACACCGGCATCTCGTACTAAAAGCTTTCTAGACCAT
BS32591.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:00:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Jon99Fi-RA | 804 | CG18030-PA | 1..804 | 17..820 | 4020 | 100 | Plus |
Jon99Fii-RA | 804 | CG2229-PA | 1..804 | 17..820 | 3795 | 98.1 | Plus |
Jon99Cii-RA | 798 | CG31034-PA | 1..798 | 17..820 | 2875 | 90.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:00:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Jon99Fi-RA | 933 | CG18030-RA | 26..829 | 17..820 | 4020 | 100 | Plus |
Jon99Fii-RA | 913 | CG2229-RA | 26..835 | 17..826 | 3810 | 98 | Plus |
Jon99Cii-RA | 862 | CG31034-RA | 29..826 | 17..820 | 2875 | 90.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:00:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30488988..30489791 | 17..820 | 4020 | 100 | Plus |
3R | 32079331 | 3R | 30487094..30487903 | 826..17 | 3810 | 98 | Minus |
3R | 32079331 | 3R | 29923790..29924587 | 820..17 | 2875 | 90.8 | Minus |
3R | 32079331 | 3R | 29922242..29923039 | 17..820 | 2830 | 90.4 | Plus |
2L | 23513712 | 2L | 4952599..4953001 | 514..115 | 720 | 79.2 | Minus |
2L | 23513712 | 2L | 4949972..4950403 | 820..392 | 685 | 77.8 | Minus |
2L | 23513712 | 2L | 4954674..4955031 | 472..112 | 615 | 78.7 | Minus |
2R | 25286936 | 2R | 8691573..8691968 | 112..513 | 605 | 77.9 | Plus |
3L | 28110227 | 3L | 8392871..8393288 | 810..396 | 510 | 75.4 | Minus |
3L | 28110227 | 3L | 8391897..8392081 | 389..573 | 505 | 84.9 | Plus |
3L | 28110227 | 3L | 6052735..6052876 | 373..514 | 320 | 81.7 | Plus |
3L | 28110227 | 3L | 8391650..8391878 | 112..349 | 295 | 76.9 | Plus |
3L | 28110227 | 3L | 6053924..6054062 | 527..389 | 290 | 80.6 | Minus |
2L | 23513712 | 2L | 4952284..4952494 | 820..610 | 245 | 74.4 | Minus |
3R | 32079331 | 3R | 29925917..29926062 | 262..120 | 230 | 78.8 | Minus |
2R | 25286936 | 2R | 8692074..8692145 | 610..681 | 225 | 87.5 | Plus |
3L | 28110227 | 3L | 8393403..8393538 | 260..119 | 225 | 78.9 | Minus |
2L | 23513712 | 2L | 4954419..4954509 | 727..637 | 200 | 81.3 | Minus |
3L | 28110227 | 3L | 9641129..9641190 | 120..181 | 190 | 87.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:00:39 has no hits.
BS32591.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:54 Download gff for
BS32591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Jon99Fi-RA | 26..827 | 17..818 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:25 Download gff for
BS32591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Jon99Fi-RA | 26..827 | 17..818 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:25 Download gff for
BS32591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30488988..30489789 | 17..818 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:54 Download gff for
BS32591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26314710..26315511 | 17..818 | 100 | | Plus |
BS32591.pep Sequence
Translation from 16 to 819
> BS32591.pep
MKLLVFLALAVAAATAIPTPEQKLVPTPVKDVKIQGRITNGYPAYEGKVP
YIVGLLFSGNGNWWCGGSIIGNTWVLTAAHCTNGASGVTINYGASLRNQP
QYTHWVGSGNFVQHHHYNSGNLHNDISLIRTPHVDFWHLVNKVELPSYND
RYQDYAGWWAVASGWGGTYDGSPLPDWLQAVDVQIMSQSDCSRTWSLHDN
MICINTNGGKSTCGGDSGGPLVTHEGNRLVGVTSFVSSAGCQSGAPAVFS
RVTGYLDWIRDNTGISY*
BS32591.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:45:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Jon99Fi-PA | 267 | CG18030-PA | 1..267 | 1..267 | 1478 | 100 | Plus |
Jon99Fii-PA | 267 | CG2229-PA | 1..267 | 1..267 | 1470 | 99.3 | Plus |
Jon99Ciii-PB | 265 | CG31362-PB | 1..265 | 1..267 | 1381 | 92.5 | Plus |
Jon99Ciii-PA | 265 | CG31362-PA | 1..265 | 1..267 | 1381 | 92.5 | Plus |
Jon99Cii-PA | 265 | CG31034-PA | 1..265 | 1..267 | 1381 | 92.5 | Plus |