BS32592.complete Sequence
593 bp assembled on 2013-09-16
GenBank Submission: KX801370
> BS32592.complete
GAAGTTATCAGTCGACATGACTTGGATCGGTTTGCTCATCGTTGGCCTCA
CAGCAATCGCTGTCCAGGGGGAAGTACCGATCGTGACGAGGGCCGAGTGG
AATGCCAAACCGCCGAACGGAGCCATAGACAGCATGGAAACTCCCTTGCC
ACGTGCTGTGATCGCCCATACAGCTGGAGGAGCTTGTGCGGATGATGTTA
CATGCTCCCAGCACATGCAAAATCTGCAAAACTTCCAGATGTCCAAGCAA
AAGTTCTCGGACATTGGCTACCACTATCTGATCGGCGGTAATGGCAAGGT
ATACGAAGGCAGAAGTCCAAGCCAGAGAGGAGCCTTTGCCGGTCCCAATA
ACGATGGTTCCCTGGGCATTGCGTTTATTGGTAACTTCGAAGAACGGGCG
CCCAACAAGGAGGCCTTGGATGCCGCCAAGGAGCTGCTGGAGCAGGCTGT
CAAACAGGCTCAGCTGGTGGAGGGCTATAAGTTACTGGGCCATCGTCAAG
TCAGTGCTACCAAGAGTCCTGGAGAAGCACTCTACGCTCTGATACAGCAG
TGGCCCAACTGGTCCGAAGAAATGTGAAAGCTTTCTAGACCAT
BS32592.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:00:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PGRP-SD-RA | 561 | CG7496-PA | 1..561 | 17..577 | 2805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:00:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PGRP-SD-RA | 721 | CG7496-RA | 26..588 | 17..579 | 2815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:00:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7651205..7651767 | 17..579 | 2815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:00:44 has no hits.
BS32592.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:56 Download gff for
BS32592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PGRP-SD-RA | 26..585 | 17..576 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:27 Download gff for
BS32592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PGRP-SD-RA | 26..585 | 17..576 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:27 Download gff for
BS32592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7651205..7651764 | 17..576 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:56 Download gff for
BS32592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7644305..7644864 | 17..576 | 100 | | Plus |
BS32592.pep Sequence
Translation from 16 to 576
> BS32592.pep
MTWIGLLIVGLTAIAVQGEVPIVTRAEWNAKPPNGAIDSMETPLPRAVIA
HTAGGACADDVTCSQHMQNLQNFQMSKQKFSDIGYHYLIGGNGKVYEGRS
PSQRGAFAGPNNDGSLGIAFIGNFEERAPNKEALDAAKELLEQAVKQAQL
VEGYKLLGHRQVSATKSPGEALYALIQQWPNWSEEM*
BS32592.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:45:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PGRP-SD-PA | 186 | CG7496-PA | 1..186 | 1..186 | 976 | 100 | Plus |
| PGRP-LC-PE | 329 | CG4432-PE | 165..329 | 22..186 | 392 | 43.6 | Plus |
| PGRP-LC-PD | 500 | CG4432-PD | 336..500 | 22..186 | 392 | 43.6 | Plus |
| PGRP-LC-PA | 500 | CG4432-PA | 336..500 | 22..186 | 392 | 43.6 | Plus |
| PGRP-SC2-PA | 184 | CG14745-PA | 8..182 | 6..182 | 340 | 41.8 | Plus |
