Clone BS32596 Report

Search the DGRC for BS32596

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:325
Well:96
Vector:pDNR-Dual
Associated Gene/TranscriptCG4398-RA
Protein status:BS32596.pep: gold
Sequenced Size:734

Clone Sequence Records

BS32596.complete Sequence

734 bp assembled on 2013-09-16

GenBank Submission: KX802612

> BS32596.complete
GAAGTTATCAGTCGACATGAGTATTTTGAGACTGGTGCTGCAATTCCTGC
TCTTCAGTTTGGTGCTGGTTTCGGGAAAGTTTCTCTATCACCGGAGCTAC
AAATACTCCCCGGAGCTGATAGCCGAACTGAAAGACTTTGAGAAGCTGAT
TCCCACGGTTACCATCGACGAAGTAGTCGCCGAGCATATGATTACGGATT
CCGGATTCCGTAAGGCCATTAAGTTTTTGCGCAGCTCCGATTTCAAGACG
CTGCAGCAGCGCATTGAGTCTCTGCCAGAAGTTGTGGATCTAATTAATTT
CGTGCACCTCAATGATACGACCCAAGAAACAGTGGAGAAGTATTGGTATC
GTAATAACACATATAACAGGCTTCGCAGGTCGGCTTATCTTAGGGAGCAG
ATTGTTTTGGTGCTACTCGAATCGAGTTCAGAGTTCACACAGTTGAGTTC
GTTCACCAGTTTCGTGCGTGAAATACTAACGCATTTGCCCCGTGATCGAT
TTGTGGCCCTGATCAATGAAAAGCGGCAGAAGAGTGCCTTGTTCGCCAAG
TTCTATCAGGCACTGAAAAGTGCAGAGTTCAAGGCGAAATCCGAAGCGGC
ATGGAAAACCAGCAATGTACAGAGCGTTGTTCAAGAACTTTCGCGACACG
CAATCGATGCCCAGGATCTGAAAACCATAGGTTACGAAGTCATCTCTTGG
GGTCCGAACACATTGTGAAAGCTTTCTAGACCAT

BS32596.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:00:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG4398-RA 702 CG4398-PA 1..702 17..718 3510 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:00:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG4398-RA 822 CG4398-RA 70..771 17..718 3510 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:00:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16432313..16432900 17..604 2940 100 Plus
2R 25286936 2R 16433018..16433132 604..718 575 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:00:19 has no hits.

BS32596.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:03:47 Download gff for BS32596.complete
Subject Subject Range Query Range Percent Splice Strand
CG4398-RA 70..770 17..717 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:21 Download gff for BS32596.complete
Subject Subject Range Query Range Percent Splice Strand
CG4398-RA 70..770 17..717 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:21 Download gff for BS32596.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16432313..16432900 17..604 100 -> Plus
2R 16433019..16433131 605..717 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:03:47 Download gff for BS32596.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12319818..12320405 17..604 100 -> Plus
arm_2R 12320524..12320636 605..717 100   Plus

BS32596.pep Sequence

Translation from 16 to 717

> BS32596.pep
MSILRLVLQFLLFSLVLVSGKFLYHRSYKYSPELIAELKDFEKLIPTVTI
DEVVAEHMITDSGFRKAIKFLRSSDFKTLQQRIESLPEVVDLINFVHLND
TTQETVEKYWYRNNTYNRLRRSAYLREQIVLVLLESSSEFTQLSSFTSFV
REILTHLPRDRFVALINEKRQKSALFAKFYQALKSAEFKAKSEAAWKTSN
VQSVVQELSRHAIDAQDLKTIGYEVISWGPNTL*

BS32596.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG4398-PA 233 CG4398-PA 1..233 1..233 1163 100 Plus
CG15712-PA 214 CG15712-PA 29..213 37..232 250 32.1 Plus