BS32646.complete Sequence
1169 bp assembled on 2013-09-16
GenBank Submission: KX805949
> BS32646.complete
GAAGTTATCAGTCGACATGAGAGCACAATTCACCATGCAGAAGAGCACAG
CCCAGATGATCATCGCAGTCTGCCTGATCTGTCAATCTTTGGCAGTGGAG
GATAAGGATAAGGCAACAAATCCATTAAATATAGATAGTGTCCAAAAACA
TAATGTCAAGCTACTCAGCGAGCAACTGAATCGCGGTTGGCGAGCATTCT
GCGATGCTCCTGTGGATGAGGGTGTGATGTCCTTATTTCAGGGCATTAAT
CCCAGCGATGCCCGACTCCATGTGATGACCATCACCAACCAGAGTGTAGA
GCTGCCCATTAAATCCATATCTCAGATCAAGGATTTCGATATCAATCCGG
AGCGTAAGACCCTCATCTATGTGAATGCCTTCCACACGGCCGATAGCTAT
TTTAGTGTGCAGGAGCACTTGACTCTGCTGCAAAACAGCAGGAGGGATCT
CAATGTAATTGTGGTGGATTTCGCAAAGGATGTGGCTCAATTGTACTATG
CAGTGCGTCATCATCTCTCCGTTAATGGCTACTTCGTTTATAAGCTGCTG
AGAGCTCTGAAGGATGCGGGCATTGCCGTGCAGGATATCACTTTGGCAGG
ACACTCAGTGGGTGCTAACATAGCCGCACTGGGTGCCCAACTTTTTGCCA
AAGAAAACAAACAATTGGTGGGCCAACTGTTGGCCATAGACCCAGCCACC
ATGTGTCGCACCACCGATATTTTGGTAAAACAAAGTGTGGCTTTAAGAGT
GGTGGTGCTGCACGGGGAGGGAGATGTTTTTGGGGTGAGGGTGCCACTGG
GTCACATCGATATCTATCCCAATGGTATTGGATACTTCCCGAGGAGGAAA
CTGCAACCTGGCTGCGAGTCCAAGATCTGCAGTCACATGTATCCATTTAT
TCTGTTCATGGAGGCTCTCATCGAGGGTGTGATGATCCCAGCTACCAAGT
GCGAGAGTTGGGCCAAGTTCCGACAGGGCGATTGTAATTTCCAGAACACC
ATCAACATTGGACTCATCTACCCAGCGAATGCCAAGGGTCTGTACTTCTG
CATGACGCAACCGAATCCTCCATTCACCTATATGGAACATGGACTGCGCT
ACAAGGCGAGACGTCCTGAGAAATCCTCTGAAAAGAACCGTATAAAGTTT
TAGAAGCTTTCTAGACCAT
BS32646.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:55:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10163-RA | 1137 | CG10163-PA | 1..1137 | 17..1153 | 5685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:55:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10163-RA | 1220 | CG10163-RA | 1..1137 | 17..1153 | 5685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:55:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6257802..6258515 | 914..201 | 3570 | 100 | Minus |
| 3L | 28110227 | 3L | 6257506..6257747 | 1153..912 | 1210 | 100 | Minus |
| 3L | 28110227 | 3L | 6258576..6258763 | 201..14 | 940 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:55:07 has no hits.
BS32646.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:01:44 Download gff for
BS32646.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10163-RA | 1..1137 | 17..1153 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:30 Download gff for
BS32646.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10163-RA | 1..1137 | 17..1153 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:30 Download gff for
BS32646.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6257506..6257745 | 914..1153 | 100 | <- | Minus |
| 3L | 6257803..6258515 | 201..913 | 100 | <- | Minus |
| 3L | 6258577..6258760 | 17..200 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:01:44 Download gff for
BS32646.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6250606..6250845 | 914..1153 | 100 | <- | Minus |
| arm_3L | 6250903..6251615 | 201..913 | 100 | <- | Minus |
| arm_3L | 6251677..6251860 | 17..200 | 100 | | Minus |
BS32646.pep Sequence
Translation from 16 to 1152
> BS32646.pep
MRAQFTMQKSTAQMIIAVCLICQSLAVEDKDKATNPLNIDSVQKHNVKLL
SEQLNRGWRAFCDAPVDEGVMSLFQGINPSDARLHVMTITNQSVELPIKS
ISQIKDFDINPERKTLIYVNAFHTADSYFSVQEHLTLLQNSRRDLNVIVV
DFAKDVAQLYYAVRHHLSVNGYFVYKLLRALKDAGIAVQDITLAGHSVGA
NIAALGAQLFAKENKQLVGQLLAIDPATMCRTTDILVKQSVALRVVVLHG
EGDVFGVRVPLGHIDIYPNGIGYFPRRKLQPGCESKICSHMYPFILFMEA
LIEGVMIPATKCESWAKFRQGDCNFQNTINIGLIYPANAKGLYFCMTQPN
PPFTYMEHGLRYKARRPEKSSEKNRIKF*
BS32646.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10163-PA | 378 | CG10163-PA | 1..378 | 1..378 | 1966 | 100 | Plus |
| CG5665-PB | 376 | CG5665-PB | 79..356 | 77..353 | 211 | 25.7 | Plus |
| CG5162-PB | 411 | CG5162-PB | 127..369 | 107..353 | 211 | 28.6 | Plus |
| CG5162-PA | 411 | CG5162-PA | 127..369 | 107..353 | 211 | 28.6 | Plus |
| CG1986-PB | 404 | CG1986-PB | 89..345 | 109..353 | 170 | 23.8 | Plus |
