Clone BS32650 Report

Search the DGRC for BS32650

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:326
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG13358-RD
Protein status:BS32650.pep: full length peptide match
Sequenced Size:938

Clone Sequence Records

BS32650.complete Sequence

938 bp assembled on 2013-09-16

GenBank Submission: KX806310

> BS32650.complete
GAAGTTATCAGTCGACATGGCCGGGTCAGTTCGTGCGACGCTCCTGGGTC
TCCTCATGCAGATCCTGTGCAATGGGCTGGCTGGTCAGCAGCTGCTCCTC
ACACGTCCCCAAAGGAGCCTGTTCGAGACTCCGCTGGGTCACGTAGAGCA
AGTGGAACAAGTGCCCTCTTTAGGCTGGAATAGTGTTGGTAGTGGACTCG
GAGTGGGCGAGTGGCCCTACAGCCCCGTTGGTCTCGGCCACATGAGCAAG
GATGAGCTGCTGACCCTGCTGGAGGCCTGGAAGGAGGTCGAGGAGGAATC
GGCCACAACAACGACTGCGTCGCCAGCGGATGCCAGCACACGTAGACCTC
CTCCGCCTCCACTGCCACCACCACCACCTCCTCCGCCACGACCCACACCC
ATACCAGTCTCCGTTGCAATCCCGTCACCGGCTGTTCCGCCCTCCGGCAC
TCCCATTACAGTGCGGCTCCCAGCCTTTGTGCCTGTGCGTCTGGCTGCCG
TGTTTACTCCGCTTGCCGGTGGACAAGCTGATAGTGCTGTTCCGTCTGCC
AACGGAGTCGGAGGGGCTGGAGGAGATGATTTGTCCACCGATGACGTGAC
AGATGATGACGGCGTCTCTACCCGGCTCTTTCGCTTTTTGCCCATGCCAG
GAGCTCGAACGAGACCGCAATCCAATTCACAGCCCAGGCAGCAATTTGTG
GTGAGGAACACCCTGGACAGCGTGGATGCGGGCACTGCCCCTGTCAGGCA
GCAGATTAAACCGGAAGTCCAGCCCAAGGCGACTGCTCCGCCTTCCATTC
CCAAGTTCCCTGGCCACCCAACTCCCTTCTTCCGTCCCAGATTTGGTGTG
CCACCGAGTCTGGCCAACGCTCGATTCGAGCTGGTGCCCTCTTCCCAAAT
CATCGGCGACTGGCGGGTGTGAAAGCTTTCTAGACCAT

BS32650.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:55:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG13358-RD 906 CG13358-PD 1..906 17..922 4530 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:55:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG13358-RD 1427 CG13358-RB 24..930 16..922 4535 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 804074..804898 840..16 4125 100 Minus
X 23542271 X 803921..804004 922..839 420 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:55:12 has no hits.

BS32650.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:01:46 Download gff for BS32650.complete
Subject Subject Range Query Range Percent Splice Strand
CG13358-RD 25..929 17..921 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:31 Download gff for BS32650.complete
Subject Subject Range Query Range Percent Splice Strand
CG13358-RD 25..929 17..921 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:31 Download gff for BS32650.complete
Subject Subject Range Query Range Percent Splice Strand
X 803922..804002 841..921 100 <- Minus
X 804074..804897 17..840 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:01:46 Download gff for BS32650.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 697955..698035 841..921 100 <- Minus
arm_X 698107..698930 17..840 100   Minus

BS32650.pep Sequence

Translation from 16 to 921

> BS32650.pep
MAGSVRATLLGLLMQILCNGLAGQQLLLTRPQRSLFETPLGHVEQVEQVP
SLGWNSVGSGLGVGEWPYSPVGLGHMSKDELLTLLEAWKEVEEESATTTT
ASPADASTRRPPPPPLPPPPPPPPRPTPIPVSVAIPSPAVPPSGTPITVR
LPAFVPVRLAAVFTPLAGGQADSAVPSANGVGGAGGDDLSTDDVTDDDGV
STRLFRFLPMPGARTRPQSNSQPRQQFVVRNTLDSVDAGTAPVRQQIKPE
VQPKATAPPSIPKFPGHPTPFFRPRFGVPPSLANARFELVPSSQIIGDWR
V*

BS32650.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG13358-PD 301 CG13358-PB 1..301 1..301 1584 100 Plus
CG42449-PB 281 CG42449-PB 10..197 10..191 230 34.8 Plus
CG42449-PA 310 CG42449-PA 10..197 10..191 230 34.8 Plus