BS32650.complete Sequence
938 bp assembled on 2013-09-16
GenBank Submission: KX806310
> BS32650.complete
GAAGTTATCAGTCGACATGGCCGGGTCAGTTCGTGCGACGCTCCTGGGTC
TCCTCATGCAGATCCTGTGCAATGGGCTGGCTGGTCAGCAGCTGCTCCTC
ACACGTCCCCAAAGGAGCCTGTTCGAGACTCCGCTGGGTCACGTAGAGCA
AGTGGAACAAGTGCCCTCTTTAGGCTGGAATAGTGTTGGTAGTGGACTCG
GAGTGGGCGAGTGGCCCTACAGCCCCGTTGGTCTCGGCCACATGAGCAAG
GATGAGCTGCTGACCCTGCTGGAGGCCTGGAAGGAGGTCGAGGAGGAATC
GGCCACAACAACGACTGCGTCGCCAGCGGATGCCAGCACACGTAGACCTC
CTCCGCCTCCACTGCCACCACCACCACCTCCTCCGCCACGACCCACACCC
ATACCAGTCTCCGTTGCAATCCCGTCACCGGCTGTTCCGCCCTCCGGCAC
TCCCATTACAGTGCGGCTCCCAGCCTTTGTGCCTGTGCGTCTGGCTGCCG
TGTTTACTCCGCTTGCCGGTGGACAAGCTGATAGTGCTGTTCCGTCTGCC
AACGGAGTCGGAGGGGCTGGAGGAGATGATTTGTCCACCGATGACGTGAC
AGATGATGACGGCGTCTCTACCCGGCTCTTTCGCTTTTTGCCCATGCCAG
GAGCTCGAACGAGACCGCAATCCAATTCACAGCCCAGGCAGCAATTTGTG
GTGAGGAACACCCTGGACAGCGTGGATGCGGGCACTGCCCCTGTCAGGCA
GCAGATTAAACCGGAAGTCCAGCCCAAGGCGACTGCTCCGCCTTCCATTC
CCAAGTTCCCTGGCCACCCAACTCCCTTCTTCCGTCCCAGATTTGGTGTG
CCACCGAGTCTGGCCAACGCTCGATTCGAGCTGGTGCCCTCTTCCCAAAT
CATCGGCGACTGGCGGGTGTGAAAGCTTTCTAGACCAT
BS32650.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:55:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13358-RD | 906 | CG13358-PD | 1..906 | 17..922 | 4530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:55:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13358-RD | 1427 | CG13358-RB | 24..930 | 16..922 | 4535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:55:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 804074..804898 | 840..16 | 4125 | 100 | Minus |
X | 23542271 | X | 803921..804004 | 922..839 | 420 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:55:12 has no hits.
BS32650.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 12:01:46 Download gff for
BS32650.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13358-RD | 25..929 | 17..921 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:31 Download gff for
BS32650.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13358-RD | 25..929 | 17..921 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:31 Download gff for
BS32650.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 803922..804002 | 841..921 | 100 | <- | Minus |
X | 804074..804897 | 17..840 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 12:01:46 Download gff for
BS32650.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 697955..698035 | 841..921 | 100 | <- | Minus |
arm_X | 698107..698930 | 17..840 | 100 | | Minus |
BS32650.pep Sequence
Translation from 16 to 921
> BS32650.pep
MAGSVRATLLGLLMQILCNGLAGQQLLLTRPQRSLFETPLGHVEQVEQVP
SLGWNSVGSGLGVGEWPYSPVGLGHMSKDELLTLLEAWKEVEEESATTTT
ASPADASTRRPPPPPLPPPPPPPPRPTPIPVSVAIPSPAVPPSGTPITVR
LPAFVPVRLAAVFTPLAGGQADSAVPSANGVGGAGGDDLSTDDVTDDDGV
STRLFRFLPMPGARTRPQSNSQPRQQFVVRNTLDSVDAGTAPVRQQIKPE
VQPKATAPPSIPKFPGHPTPFFRPRFGVPPSLANARFELVPSSQIIGDWR
V*
BS32650.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13358-PD | 301 | CG13358-PB | 1..301 | 1..301 | 1584 | 100 | Plus |
CG42449-PB | 281 | CG42449-PB | 10..197 | 10..191 | 230 | 34.8 | Plus |
CG42449-PA | 310 | CG42449-PA | 10..197 | 10..191 | 230 | 34.8 | Plus |