BS32701.complete Sequence
1337 bp assembled on 2014-01-22
GenBank Submission: KX804170
> BS32701.complete
GAAGTTATCAGTCGACATGGGCTTTCTATCGAAGGCTGCCTACATCGTGT
GGGCCGTCCTGTTCGAGCAGGAGATCATGGGCTTTGTTCCTATTGAAGAG
CGCAGTCCGCAGGGATCGCCGGTCCTCAACTCCCGGATGCCACAGCGTGC
GCCGCCACCATTTCGCAGAGATTTCGAGGCCAAACTGCGCAGTTTCTATC
GCAAACTAGAGTCCAAGGGCTACGGACAAGGACCACACAAGCTTAAACTG
CACATTCGTCGCAGCCATTTGCTGGAGGACGCCTTCCGGCGCATCATGTC
CGCCAACAAGAAGGACCTGCAACGCGGCCGACTCGCCGTGCTCTGGGATA
CGGAGGAGGGCCTGGACTATGGCGGACCATCACGCGAGTTCTTCTTCCTA
CTTTCGCGCGAACTGTTTAATCCGTACTACGGACTGTTCGAGTACTCAGC
CAACGATACGTACACCGTGCAGGTGTCACCATTGTCGGCGTTCGTGGATA
ATTGCCACGATTGGTTCCGCTTTAGTGGACGAGTTTTGGGATTGGCACTG
GTACATCAGTATCTACTGGACGCATTCTTTACGCGTCCCTTTTACAAGGC
GCTGCTGCGCCTGCCCGTGGCTCTCAGTGATTTGGAGTCGCTGGACAATG
AGTTCCATCAGTCGCTCCAATGGATACGCGACAATGACATCGGCACGGGC
GTGGATCTTGGCCTAACGTTCTGTGTCACAGAGGAGCTGCTTGGCAGTGT
GGTGGACAGGGAACTGAAGCCCGGTGGCAAGAATATCATCATCAACGAGA
AGAACAAAAAGGAGTACTTGGAGCGCATGATTAAGTGGCGTCTGGAGCGC
GGTGTTCAGGAGCAGACCGAGTCGCTGGTGCGCGGCTTTTACGAGGTGAT
CGACTCGCGCCTCGTTTCCGTCTTTGATGCCCGAGAGTTGGAGCTGGTTA
TTGCCGGCACTGCAGAAATAGACACAAACGATTGGCGCCTGAACACAGAG
TATCGTTCTGGTTACCATGATAACCACCAGGTGATCGTTTGGTTCTGGCA
GGTTATCGAGCGCTTTAGCAACGAGCAGCGTCTTCGTCTGCTTCAGTTCG
TGACTGGCACGTCGAGCATACCGTACGAAGGATTCTCGGCATTACGCGGA
TCGACTGGCCCGAGGCGTTTCTGCATCGAGAAGTGGGGCAAGCCAAATGC
ACTGCCCCGTGCCCACACATGCTTCAATCGGCTGGATTTGCCGCCGTATC
CAACACCCGAACTGCTGTACGAGAAGCTGCTGCTGGCCGTCGAGGAGACC
AACACGTTCGGCATTGAGTAGAAGCTTTCTAGACCAT
BS32701.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:42:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42797-RF | 1305 | CG42797-PF | 1..1305 | 17..1321 | 6525 | 100 | Plus |
| CG42797-RE | 4272 | CG42797-PE | 3009..4272 | 58..1321 | 6320 | 100 | Plus |
| CG42797-RC | 1311 | CG42797-PC | 48..1311 | 58..1321 | 6320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42797-RF | 2596 | CG42797-RF | 518..1823 | 17..1322 | 6530 | 100 | Plus |
| CG42797-RE | 6200 | CG42797-RE | 3361..4625 | 58..1322 | 6325 | 100 | Plus |
| CG42797-RC | 1954 | CG42797-RC | 192..1456 | 58..1322 | 6325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9620593..9621668 | 247..1322 | 5380 | 100 | Plus |
| X | 23542271 | X | 9620343..9620531 | 58..246 | 945 | 100 | Plus |
| X | 23542271 | X | 9616575..9616615 | 17..57 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:42:54 has no hits.
BS32701.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:00 Download gff for
BS32701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42797-RF | 518..1822 | 17..1321 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:57 Download gff for
BS32701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42797-RF | 518..1822 | 17..1321 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:57 Download gff for
BS32701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9616575..9616615 | 17..57 | 100 | -> | Plus |
| X | 9620343..9620531 | 58..246 | 100 | -> | Plus |
| X | 9620593..9621667 | 247..1321 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:00 Download gff for
BS32701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9510608..9510648 | 17..57 | 100 | -> | Plus |
| arm_X | 9514376..9514564 | 58..246 | 100 | -> | Plus |
| arm_X | 9514626..9515700 | 247..1321 | 100 | | Plus |
BS32701.pep Sequence
Translation from 16 to 1320
> BS32701.pep
MGFLSKAAYIVWAVLFEQEIMGFVPIEERSPQGSPVLNSRMPQRAPPPFR
RDFEAKLRSFYRKLESKGYGQGPHKLKLHIRRSHLLEDAFRRIMSANKKD
LQRGRLAVLWDTEEGLDYGGPSREFFFLLSRELFNPYYGLFEYSANDTYT
VQVSPLSAFVDNCHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRLP
VALSDLESLDNEFHQSLQWIRDNDIGTGVDLGLTFCVTEELLGSVVDREL
KPGGKNIIINEKNKKEYLERMIKWRLERGVQEQTESLVRGFYEVIDSRLV
SVFDARELELVIAGTAEIDTNDWRLNTEYRSGYHDNHQVIVWFWQVIERF
SNEQRLRLLQFVTGTSSIPYEGFSALRGSTGPRRFCIEKWGKPNALPRAH
TCFNRLDLPPYPTPELLYEKLLLAVEETNTFGIE*
BS32701.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42797-PF | 434 | CG42797-PF | 1..434 | 1..434 | 2294 | 100 | Plus |
| CG42797-PC | 436 | CG42797-PC | 17..436 | 15..434 | 2222 | 100 | Plus |
| CG42797-PE | 1423 | CG42797-PE | 1004..1423 | 15..434 | 2222 | 100 | Plus |
| CG42797-PD | 1426 | CG42797-PD | 1007..1426 | 15..434 | 2222 | 100 | Plus |
| Nedd4-PE | 793 | CG7555-PD | 410..789 | 48..431 | 986 | 49.6 | Plus |
