BS32704.complete Sequence
725 bp assembled on 2014-01-22
GenBank Submission: KX804842
> BS32704.complete
GAAGTTATCAGTCGACATGGTGGAGGCAGCTCTTCAAACTGATCCAGAAA
ATGAAGAGCTATTAAAACTCAGAAGTGATCTTGACGAAGTTATTACCCTT
ACTCGTGATTTGATACAAACTCAACTGGAAGAACAAAATAAATCTTCATA
TGTGGAGCCATCATCAACCAAAAGAGATTCGTCCAACTACTTCGACGAAA
TAGAAGCAGCTCTATTAGAAGCAGAAAAATTAGTTTCAGCTGCTAAGATT
TGGAAAAAAGGAGACAAGTGTCAAGCTAAATGGAAGGAGGATCGTCAGTA
CTACGATGCAACTATTGAAGATATATCAAGTACAGGAGAAGTTAATGTAA
TATTCGATGCCTATCAAAATCGATCTACGACCCACGTCAATGAGTTGCGT
GAACGTACTATTCGCAACGAAGTTTTTCCGTCAAACAAGCGGCACAGGCC
CAATCAAAAAGAATATTTAAAAAAACGTAAGCAAAAAAAGCAACAGCGCT
TCAAGGACTTGGAAGAGGAACGTGAATCAGACAAGAACAAATGGCTTAAT
TTTAACAACAAAAACCAAAAAAAAAACGGAATGAAAGCAAGAAGTATATT
TGCGTCTCCGGATAATGTAAGCGGCAGAGTAGGAGTCGGCACTTGTGGAA
CTGCAGGAAAGGGCATGACAGATTTTACTGTGGGTGAAAAATATAGAAAA
GGTCTTTAGAAGCTTTCTAGACCAT
BS32704.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:43:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17454-RB | 693 | CG17454-PB | 1..693 | 17..709 | 3465 | 100 | Plus |
| CG17454-RA | 732 | CG17454-PA | 43..732 | 20..709 | 3450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17454-RB | 1163 | CG17454-RB | 425..1119 | 17..711 | 3475 | 100 | Plus |
| CG17454-RA | 880 | CG17454-RA | 145..836 | 20..711 | 3460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 23715901..23716321 | 19..439 | 2105 | 100 | Plus |
| 3L | 28110227 | 3L | 23716369..23716645 | 435..711 | 1370 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:43:03 has no hits.
BS32704.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:03 Download gff for
BS32704.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17454-RB | 425..1117 | 17..709 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:00 Download gff for
BS32704.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17454-RB | 425..1117 | 17..709 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:00 Download gff for
BS32704.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 23715900..23716320 | 17..438 | 99 | -> | Plus |
| 3L | 23716373..23716643 | 439..709 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:03 Download gff for
BS32704.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 23709000..23709420 | 17..438 | 99 | -> | Plus |
| arm_3L | 23709473..23709743 | 439..709 | 100 | | Plus |
BS32704.pep Sequence
Translation from 16 to 708
> BS32704.pep
MVEAALQTDPENEELLKLRSDLDEVITLTRDLIQTQLEEQNKSSYVEPSS
TKRDSSNYFDEIEAALLEAEKLVSAAKIWKKGDKCQAKWKEDRQYYDATI
EDISSTGEVNVIFDAYQNRSTTHVNELRERTIRNEVFPSNKRHRPNQKEY
LKKRKQKKQQRFKDLEEERESDKNKWLNFNNKNQKKNGMKARSIFASPDN
VSGRVGVGTCGTAGKGMTDFTVGEKYRKGL*
BS32704.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17454-PB | 230 | CG17454-PB | 1..230 | 1..230 | 1189 | 100 | Plus |
| CG17454-PA | 243 | CG17454-PA | 15..243 | 2..230 | 1184 | 100 | Plus |
