BS32706.complete Sequence
869 bp assembled on 2014-01-22
GenBank Submission: KX800729
> BS32706.complete
GAAGTTATCCGTCGACATGACGCAGGACATGCTGCTGGGCAACGAGGAGC
CGAGCAAGAGCAAGGAGACGTTCCTGGAGAAGTTCTGTGTCCTGGCCAAG
TCATCCACCGGCGCCGCTTTGCTGGATGTGATTCGCCAGGCCCTGGAAGC
CCCGAATGTCTTTGTTTTTGGCGAATTACTGGCGGAGCCATCCGTTTTGC
AGCTTAAAGACGGTCCGGACTCCAAGCACTTCGAGACCCTGAACCTATTC
GCATACGGCACATACAAGGAATACCGTGCACAGCCGGAAAAGTTCATCGA
GCTGACTCCTGCCATGCAGAAGAAGCTGCAGCACCTGACTATCGTCTCGC
TGGCCATTAAAGCAAAGAGCATTCCCTATGCCCTGCTGCTCAGCGAACTG
GAGATCGACAACGTCCGCCACTTGGAGGATATCATCATAGAGGCCATCTA
CGCGGACATCATCCACGGAAAGCTGTTCCAGAACACACGAATTTTGGAAG
TGGACTACGCCCAGGGCCGCGACATTCCGCCCGGATACACTGGCCAGATC
GTGGAAACCCTTCAGGCGTGGGTCAACTCCTGCGACAGCGTTTCCAATTG
CATCGAAATGCAGATTAAGTACGCGAATGCCGAGAAATCTAAAAGGCTGA
TTAACAAAGAGCGCGTGGAACAAGATCTCATCAATCTTAAGAAGGTTTTA
AAGAGCCAGACCTCGGATAGCGATGAGAGCATGCAAATCGACACCCACGG
ACCGGGAACCAGTGGCGGACTGGGTCAATCGGAGCTAAGGAAGAAGCCCT
CCAAGCTGAGGAATCCACGCAGCGCGGCAGTGGGCCTCAAGTTTAGCAAG
TGAAAGCTTTCTAGACCAT
BS32706.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:43:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CSN7-RA | 837 | CG2038-PA | 1..837 | 17..853 | 4185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CSN7-RA | 1186 | CG2038-RA | 79..915 | 17..853 | 4185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8421355..8421609 | 201..455 | 1275 | 100 | Plus |
| 2R | 25286936 | 2R | 8427573..8427799 | 450..676 | 1120 | 99.6 | Plus |
| 2R | 25286936 | 2R | 8421111..8421296 | 17..202 | 930 | 100 | Plus |
| 2R | 25286936 | 2R | 8427993..8428146 | 677..830 | 770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:43:12 has no hits.
BS32706.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:05 Download gff for
BS32706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN7-RA | 79..914 | 17..852 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:04 Download gff for
BS32706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN7-RA | 79..914 | 17..852 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:04 Download gff for
BS32706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8421111..8421296 | 17..202 | 100 | -> | Plus |
| 2R | 8421357..8421609 | 203..455 | 100 | -> | Plus |
| 2R | 8427579..8427799 | 456..676 | 100 | -> | Plus |
| 2R | 8427993..8428146 | 677..830 | 100 | -> | Plus |
| 2R | 8428284..8428305 | 831..852 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:05 Download gff for
BS32706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4308616..4308801 | 17..202 | 100 | -> | Plus |
| arm_2R | 4308862..4309114 | 203..455 | 100 | -> | Plus |
| arm_2R | 4315084..4315304 | 456..676 | 100 | -> | Plus |
| arm_2R | 4315498..4315651 | 677..830 | 100 | -> | Plus |
| arm_2R | 4315789..4315810 | 831..852 | 100 | | Plus |
BS32706.pep Sequence
Translation from 16 to 852
> BS32706.pep
MTQDMLLGNEEPSKSKETFLEKFCVLAKSSTGAALLDVIRQALEAPNVFV
FGELLAEPSVLQLKDGPDSKHFETLNLFAYGTYKEYRAQPEKFIELTPAM
QKKLQHLTIVSLAIKAKSIPYALLLSELEIDNVRHLEDIIIEAIYADIIH
GKLFQNTRILEVDYAQGRDIPPGYTGQIVETLQAWVNSCDSVSNCIEMQI
KYANAEKSKRLINKERVEQDLINLKKVLKSQTSDSDESMQIDTHGPGTSG
GLGQSELRKKPSKLRNPRSAAVGLKFSK*
BS32706.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CSN7-PA | 278 | CG2038-PA | 1..278 | 1..278 | 1403 | 100 | Plus |
