Clone BS32721 Report

Search the DGRC for BS32721

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:327
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptTctp-RA
Protein status:BS32721.pep: gold
Sequenced Size:551

Clone Sequence Records

BS32721.complete Sequence

551 bp assembled on 2014-01-22

GenBank Submission: KX803207

> BS32721.complete
GAAGTTATCAGTCGACATGAAGATCTACAAGGATATCATCACCGGCGACG
AGATGTTTGCCGACACCTACAAGATGAAGCTGGTGGATGATGTGATCTAC
GAGGTGTACGGAAAGCTGATCACCCGCCAGGGTGACGATATCAAGCTGGA
GGGCGCCAACGCATCCGCCGAGGAGGCCGACGAGGGCACTGATATCACCT
CGGAGTCTGGCGTGGATGTTGTGCTTAACCACCGACTGACGGAGTGCTTC
GCCTTCGGCGACAAGAAGTCGTACACCCTCTACCTGAAGGACTACATGAA
GAAGGTGCTGGCCAAGCTGGAGGAGAAGTCGCCCGACCAGGTCGACATCT
TCAAGACCAACATGAACAAGGCCATGAAGGACATCCTTGGCCGCTTCAAG
GAGCTGCAGTTCTTCACCGGCGAATCTATGGACTGCGACGGCATGGTGGC
CCTGGTGGAATACCGCGAAATCAACGGCGACAGCGTGCCCGTGCTCATGT
TCTTCAAGCACGGTCTGGAGGAGGAGAAATGCTAGAAGCTTTCTAGACCA
T

BS32721.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:44:01
Subject Length Description Subject Range Query Range Score Percent Strand
Tctp-RB 519 CG4800-PB 1..519 17..535 2595 100 Plus
Tctp-RA 519 CG4800-PA 1..519 17..535 2595 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:44:02
Subject Length Description Subject Range Query Range Score Percent Strand
Tctp-RB 1652 CG4800-RB 134..654 16..536 2605 100 Plus
Tctp-RA 1036 CG4800-RA 134..654 16..536 2605 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11210380..11210900 16..536 2605 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:44:00 has no hits.

BS32721.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:22 Download gff for BS32721.complete
Subject Subject Range Query Range Percent Splice Strand
Tctp-RA 135..653 17..535 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:23 Download gff for BS32721.complete
Subject Subject Range Query Range Percent Splice Strand
Tctp-RA 135..653 17..535 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:23 Download gff for BS32721.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11210381..11210899 17..535 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:22 Download gff for BS32721.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7036103..7036621 17..535 100   Plus

BS32721.pep Sequence

Translation from 16 to 534

> BS32721.pep
MKIYKDIITGDEMFADTYKMKLVDDVIYEVYGKLITRQGDDIKLEGANAS
AEEADEGTDITSESGVDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAK
LEEKSPDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYR
EINGDSVPVLMFFKHGLEEEKC*

BS32721.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:21
Subject Length Description Subject Range Query Range Score Percent Strand
Tctp-PB 172 CG4800-PB 1..172 1..172 890 100 Plus
Tctp-PA 172 CG4800-PA 1..172 1..172 890 100 Plus