BS32724.complete Sequence
671 bp assembled on 2014-07-07
GenBank Submission: KX803918
> BS32724.complete
GAAGTTATCAGTCGACATGCCACACAGCCGGATCCATACAATGTGGCCCA
TTATGATAGGTGTAATCATCGCCAGCTCGTGCTGCGTAGACGGCCAGTCC
TATCTCTTCAGCGTGGAGAACGTTCTCCACGAGTCCGCCCGCCCACTGCC
CTACAACTTGACAAACGCCAACGGAACCACCGAGGTGGAATTGTTTCCCG
ACACCATCTCAAACAACACGCGGATTATTGTCTACAAGAACACTGTCGTC
GAGTCGCCCAACGATCTGTCCCAGACGGCAATGGATGTGATCACGATTGT
GTGGTATGTGGCCACTTTCCTGGCCCTGGCCGCCTTCTTCATGCTGATGG
CCTGTTCGGATCGCAGATGCCGCGACATGAGGCGTCGTCCCGCCGGAGGT
CAATCCACCGAGGGTCTGAGGGCACCACCCACGCCCTCGCCATCCTACAG
CGAATTTGCGCCTCCCAGCTACGATACGGTGATCAAGATGCAGCACGCGG
CCAAGACGAGCGTGTTTGTGATACCGTTCAGCAACAAGGCCGGTGAATTG
GGTGCACCACCGTCGGGTACGCCGCCCCCAACTTCCAACCCATTGCCAGC
CGCAGTCACCTGCGATGTGATCATCGTCAATGAACTGCAGAAGTCCGCTG
ACTAAAAGCTTTCTAGACCAT
BS32724.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:08:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15673-RC | 615 | CG15673-PC | 1..615 | 41..655 | 3075 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:08:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15673-RC | 1143 | CG15673-RC | 243..882 | 16..655 | 3200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:08:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21608654..21609066 | 655..243 | 2065 | 100 | Minus |
| 2R | 25286936 | 2R | 21609779..21609959 | 242..62 | 905 | 100 | Minus |
| 2R | 25286936 | 2R | 21612783..21612829 | 62..16 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 15:08:28 has no hits.
BS32724.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-07 10:51:09 Download gff for
BS32724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15673-RC | 244..880 | 17..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:32:16 Download gff for
BS32724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15673-RC | 244..880 | 17..653 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:32:16 Download gff for
BS32724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21608656..21609066 | 243..653 | 100 | <- | Minus |
| 2R | 21609779..21609958 | 63..242 | 100 | <- | Minus |
| 2R | 21612783..21612828 | 17..62 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-07 10:51:09 Download gff for
BS32724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17496161..17496571 | 243..653 | 100 | <- | Minus |
| arm_2R | 17497284..17497463 | 63..242 | 100 | <- | Minus |
| arm_2R | 17500288..17500333 | 17..62 | 100 | | Minus |
BS32724.pep Sequence
Translation from 16 to 654
> BS32724.pep
MPHSRIHTMWPIMIGVIIASSCCVDGQSYLFSVENVLHESARPLPYNLTN
ANGTTEVELFPDTISNNTRIIVYKNTVVESPNDLSQTAMDVITIVWYVAT
FLALAAFFMLMACSDRRCRDMRRRPAGGQSTEGLRAPPTPSPSYSEFAPP
SYDTVIKMQHAAKTSVFVIPFSNKAGELGAPPSGTPPPTSNPLPAAVTCD
VIIVNELQKSAD*
BS32724.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:06:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15673-PC | 204 | CG15673-PC | 1..204 | 9..212 | 1066 | 100 | Plus |
