BS32726.complete Sequence
725 bp assembled on 2014-01-22
GenBank Submission: KX800440
> BS32726.complete
GAAGTTATCAGTCGACATGCAGATGCACATGGAACTCTCCTATGGCCGCG
GCTACGATCCAATCGGGAGGCAACCACCGTCTCTTCCTCCTCCGTCGCAA
CAGCACTGGTCCAGCAATGGGTTCTCCGACGACTCCGCTTCCTGCTTCCG
TCGGGGATCCTATATTGAACTGGCCAGCGGAGCCATGCGTCGCGTGGAGG
ACATACGCACCGAGGACTTCATCCAGTCGGCGCTGCGCAGTCAACTATTT
GAGCTGCGAGAGGCGACAGTAGTGAGGATAGACTGGAGTGGATGCCCCAG
CCTGGTGACACTCACCTTCAGCTACGACACACACCACGCCAAGATGGACT
TGCAGGTGCAGCCGGGTCATCCAATGTTTGTTTACGGACAGGGCTGGGCC
TCCTGCGATCCACAGTTGTCGCTGCAGCTGTACGAGCTCAAATGCCAGCA
GCTGCAGGTGGGCGACATATGTTTGTCGCTGGTGCCAAACGAGCAGCCCG
CCGCACCATGTCCGCCTCAGCCGGCGCCGCCACCGCCGTGTCCGCCTCCT
TCTCTGCCCCCGTCCATGGAAATGCCAGTGCCGATGGGTTCTCCGCCTAC
CGGAAGCTATGGATTTCTGCCGTTTAAGCATCCGTACGAGATGTACGCCC
AAATGGCCAGTTTTGTGGCCGTGTACACCCAGCACATGATGGGAAAGCTA
AACTATTAAAAGCTTTCTAGACCAT
BS32726.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:44:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atx-1-RB | 693 | CG4547-PB | 1..693 | 17..709 | 3465 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:44:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atx-1-RB | 890 | CG4547-RB | 47..744 | 12..709 | 3490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:44:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6823690..6824057 | 342..709 | 1840 | 100 | Plus |
| X | 23542271 | X | 6823413..6823642 | 118..347 | 1135 | 99.6 | Plus |
| X | 23542271 | X | 6823250..6823355 | 12..117 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:44:17 has no hits.
BS32726.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:27 Download gff for
BS32726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atx-1-RB | 52..742 | 17..707 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:30 Download gff for
BS32726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atx-1-RB | 52..742 | 17..707 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:30 Download gff for
BS32726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6823255..6823355 | 17..117 | 100 | -> | Plus |
| X | 6823413..6823638 | 118..343 | 100 | -> | Plus |
| X | 6823692..6824055 | 344..707 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:27 Download gff for
BS32726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6717288..6717388 | 17..117 | 100 | -> | Plus |
| arm_X | 6717446..6717671 | 118..343 | 100 | -> | Plus |
| arm_X | 6717725..6718088 | 344..707 | 100 | | Plus |
BS32726.pep Sequence
Translation from 16 to 708
> BS32726.pep
MQMHMELSYGRGYDPIGRQPPSLPPPSQQHWSSNGFSDDSASCFRRGSYI
ELASGAMRRVEDIRTEDFIQSALRSQLFELREATVVRIDWSGCPSLVTLT
FSYDTHHAKMDLQVQPGHPMFVYGQGWASCDPQLSLQLYELKCQQLQVGD
ICLSLVPNEQPAAPCPPQPAPPPPCPPPSLPPSMEMPVPMGSPPTGSYGF
LPFKHPYEMYAQMASFVAVYTQHMMGKLNY*
BS32726.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atx-1-PB | 230 | CG4547-PB | 1..230 | 1..230 | 1266 | 100 | Plus |
