BS32733.complete Sequence
854 bp assembled on 2014-01-22
GenBank Submission: KX802010
> BS32733.complete
GAAGTTATCAGTCGACATGGTTTCGCACTACTACAACACACTGCCCTACA
CACAAAAGCACAGTGCCGCCAATTTGGCCTATGCCTCAGCGGCGGGCCAG
CCATGGAACTGGACGCCCAACTACCACCACACGCCGCCGAACCACCAGTT
CCTGGGCGATGTGGACTCCTCGCATGCCGCCCACCACGCGGCCGCTGCCC
ACCAGATGTACTACAACTCCCATCACATGTTCCACTCGGCGGCGGCGGCC
TCTGCCGGGGAGTGGCACTCACCCGCCTCGAGCACGGCGGATAACTTCGT
TCAGAATGTGCCCACGTCGGCCCACCAGCTGATGCAGCAGCACCACCATC
ATCACGCCCATGCCTCCAGCAGTTCCGCCAGTTCCGGGAGCAGCAGTAGC
GGTGGTGCACCGGGTGCGCCCCAGCTCAACGAGACCAACAGCAGCATCGG
CGTCGGAGGAGCAGGCGGTGGCGGTGGTGTTGGCGGGGCCACCGATGGAG
GACCAGGTTCCGCACCACCCAACCATCAGCAGCACATCGCCGAAGGTCTG
CCGTCGCCACCGATTACCGTTTCGGGCTCGGAAATCTCTAGCCCGGGGGC
GCCGACTTCTGCCTCGTCGCCGCATCATCACTTGGCACACCATTTGAGTG
CCGTCGCCAACAACAACAACAACAACAACAACAACAACAATAGCCCATCC
ACCCATAACAACAACAACAATAACAATTCGGTGAGCAACAACAACAGGAC
ATCGCCATCGAAGCCGCCATACTTCGACTGGATGAAGAAGCCCGCCTATC
CAGCACAACCACAACCAGTTCATGCAAATTTTCTGTGAAAGCTTTCTAGA
CCAT
BS32733.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:44:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cad-RC | 1338 | CG1759-PC | 1..802 | 17..818 | 4010 | 100 | Plus |
| cad-RB | 1284 | CG1759-PB | 1..802 | 17..818 | 4010 | 100 | Plus |
| cad-RA | 1284 | CG1759-PA | 1..802 | 17..818 | 4010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:44:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cad-RC | 2570 | CG1759-RC | 378..1179 | 17..818 | 4010 | 100 | Plus |
| cad-RB | 2353 | CG1759-RB | 215..1016 | 17..818 | 4010 | 100 | Plus |
| cad-RA | 2516 | CG1759-RA | 378..1179 | 17..818 | 4010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:44:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20771108..20771909 | 17..818 | 4010 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 14:44:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 5095..5139 | 20..64 | 117 | 73.3 | Plus |
BS32733.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:31 Download gff for
BS32733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cad-RD | 378..1198 | 17..837 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:36 Download gff for
BS32733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cad-RA | 378..1182 | 17..822 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:36 Download gff for
BS32733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20771108..20771909 | 17..818 | 100 | -> | Plus |
| 2L | 20772836..20772854 | 819..837 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:31 Download gff for
BS32733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20771108..20771909 | 17..818 | 100 | -> | Plus |
| arm_2L | 20772836..20772854 | 819..837 | 100 | | Plus |
BS32733.pep Sequence
Translation from 16 to 837
> BS32733.pep
MVSHYYNTLPYTQKHSAANLAYASAAGQPWNWTPNYHHTPPNHQFLGDVD
SSHAAHHAAAAHQMYYNSHHMFHSAAAASAGEWHSPASSTADNFVQNVPT
SAHQLMQQHHHHHAHASSSSASSGSSSSGGAPGAPQLNETNSSIGVGGAG
GGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTSAS
SPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKP
PYFDWMKKPAYPAQPQPVHANFL*
BS32733.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cad-PB | 427 | CG1759-PB | 1..267 | 1..267 | 1480 | 100 | Plus |
| cad-PA | 427 | CG1759-PA | 1..267 | 1..267 | 1480 | 100 | Plus |
| cad-PC | 445 | CG1759-PC | 1..267 | 1..267 | 1480 | 100 | Plus |
| dsx-PF | 427 | CG11094-PF | 168..330 | 51..200 | 172 | 32.7 | Plus |
| dsx-PC | 427 | CG11094-PC | 168..330 | 51..200 | 172 | 32.7 | Plus |
