Clone BS32735 Report

Search the DGRC for BS32735

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:327
Well:35
Vector:pDNR-Dual
Associated Gene/TranscriptCG44270-RA
Protein status:BS32735.pep: full length peptide match
Sequenced Size:425

Clone Sequence Records

BS32735.complete Sequence

425 bp assembled on 2014-01-22

GenBank Submission: KX802358

> BS32735.complete
GAAGTTATCAGTCGACATGGAAACTTTGAACACGACCAAAATCCCACTAA
GTAAGTGTACGCCCAGTTCAGTTCGGTTTGGGTACCGGGAATATCCTCCG
AGGTTCCAGGTTAGCCCGGGTCCTCCATGCTCTCCATGTTCTCCTGGCTC
TCCGACAGGGTTCAGCTGCACCAGGTGTGCCCGTGCCCGGGTGTCTTCCA
CCTTTCGGTTTCCAGCCCCGAAACCGGAATCTACGATTGAATTTCAGACA
GTATACGGCATCCAGGCACCCAGGCACCCAACCACCCAAACCACCATCCG
GCGACCAAGGAAAACGCAAAGGCTTTTGCAATTTTTATGTGCAATTTTTT
ACATGAGAACCAAAGGCGGTACGAAGTGTCGCTTGTGGCTCGTTAAGGTT
AAGGGGTGAAAGCTTTCTAGACCAT

BS32735.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:44:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG44270-RA 393 CG44270-PA 1..393 17..409 1965 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:44:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG44270-RA 712 CG44270-RA 112..505 17..410 1970 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:44:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20531388..20531626 172..410 1195 100 Plus
2L 23513712 2L 20531177..20531331 17..171 775 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:44:09 has no hits.

BS32735.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:25 Download gff for BS32735.complete
Subject Subject Range Query Range Percent Splice Strand
CG44270-RA 112..503 17..408 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:27 Download gff for BS32735.complete
Subject Subject Range Query Range Percent Splice Strand
CG44270-RA 112..503 17..408 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:27 Download gff for BS32735.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20531177..20531331 17..171 100 -> Plus
2L 20531388..20531624 172..408 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:25 Download gff for BS32735.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20531177..20531331 17..171 100 -> Plus
arm_2L 20531388..20531624 172..408 100   Plus

BS32735.pep Sequence

Translation from 16 to 408

> BS32735.pep
METLNTTKIPLSKCTPSSVRFGYREYPPRFQVSPGPPCSPCSPGSPTGFS
CTRCARARVSSTFRFPAPKPESTIEFQTVYGIQAPRHPTTQTTIRRPRKT
QRLLQFLCAIFYMRTKGGTKCRLWLVKVKG*

BS32735.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG44270-PA 130 CG44270-PA 1..130 1..130 710 100 Plus