BS32736.complete Sequence
2144 bp assembled on 2014-03-03
GenBank Submission: KX802741
> BS32736.complete
GAAGTTATCAGTCGACATGGCCTTGGAGTCCGGCAGCAGCAGCTCGGAGT
CGGGCAGCTCATCCACAAGCGGATCCACCAGTTCGGAAACGGGCAGCAGC
TCGGACACGGATTCCAGCAGTGCGACGCCGGAGGAGAAGCCATCCACGAA
TTCCTCCGCCAAATCCCAGACGCAAACACAACAACAAACTAATTCCGGAA
ATGCACAGAGAAGAAAGCCTGTTCCTGCGGCGTCGGAGGATAAACCCAAG
CCGAGCGTAGCGCCATCTAGCAAAAAAGTAAACAATCCTCCCAAAAGTAA
ACTCTCCAGCGATGACGACGAATATGAGGACTCGGCGCCGCCGGCCAAAA
AGAACTCACGTGCAATGGGCAGTTCCACTGTAACAGCGGCAGCTGCCGCC
TCAGCAGCCAGGAGAAAACCACCCGCGTCCGTCAACAAGCCAAGCAATCC
CGCTAACAAACCGAGCAATCCTACCCAGCGATCGGCCAACAACAACACAA
ATCGATCACTGGAGAACGGCGAGGGCAAGCGACCCTCGCTCTCCTCCTCG
TCCAATAGCACAGATGACTCTATGAAGATCGTTAAAAACGGGCGGAAGGT
TCCCCTCAAAATGGCCAGCACGGTGAGGCCCAAACAAATCCGAGGAAAAT
TGCCGCCGGCAAAGAAAAACGGCGGGGGACCGGTGATCAGCAGTGACGGA
AGTTCGGGCTCCGAGAGTGGCTCCAACTCGGGCGACGAATCAAGTTCAGG
AAGCGAGTCTGAGGGAAGTGATTCCAGCAACTCCTACAGCTCGCAGCCAG
TAAAAGGAGGAGCTAAAGGTAAGAGAAGCGGACCAACAAAAATCCAAAAC
TCCGACAGCGAAGAAGAGCGAAAAGACAAGGCCAATCCCATGAGGAAACT
GACGCGATCACTCAGCATGCGAAGGACAAAACAGCAACCCAAACAGGAAA
CCGATTCTGAATCCGATGGAGACCTAGAAGATGACAAAATTATGATCTCC
AAAAGTCCCGCCAAAAAGCCAGCGCCCTCGAATTTGAACGCCAGCAAAAG
CAAAGTGAAAAGGGAACCAATCGGAATCAGCAGTGGCGTGCTGAGCTCCA
TTAAATCCCGACCCGTGTCACCGATTACCCAGACTGAGAAGAAGTGTCCC
ATCGAGGGCTGCGATTCATCCGGACATCTGAGTGGCAATTTGGATAAGCA
CTTTTTGCCGGAGGCCTGTCCTATCTATCACAACATGTCCGCCTCGGAGT
GCAAAGAGCGTGCCAATGAGAGAAAACTGAGGAATGAACAGCGACTAAAG
ATGCCGGTTAACATTGTGACGGCGCCGGGTAACCAAAACACCAATCTCAA
GACGCTCTCGCCTGAGCAGCGCGAGTTTCTGGCCAAGATTCGCGAGTCAA
GGGCTAACTTTAAGCCGGCGAATAACAATTTTTTAGACTCGAAGGTAAAG
CTGGAAAAAGACGTAACGGACGAGGACCGGGAACCAAATCTGGCAGGCCT
GGTGCCTGACTATGATTTGCAATTGTTCCGGGAAGCGCAAGCTCAAGCAT
CCGAAAGGATCGAAGACGAACTCAAGGACCTGCCCGTGGGAAAGGGAATA
AAATATATCAGCATGGGCAAGTACAAGATGAAGGTCTGGTATCAATCCCC
TTATCCGGACGATGCTGCCCGCCTGCCCAAAATGTATATCTGCGAATTCT
GCCTGCGCTACCAAAAATCAGAGACGGGCATCAAGCGGCATGCCGAGAAA
TGCGTCTGGCGGCATCCGCCGGGCGATGAGATATACCGCAAGGGCAAACT
ACAGGTGTGGCAGGTGGACGGGAAACGTTATAAGCAATACTGTCAGCATC
TGTGCCTGCTAGCAAAATTCTTTCTGGATCACAAAACCCTCTACTACGAT
GTGGAGCCCTTCCTTTTCTACATTATGACGCTGGCCGATGTGGATGGATG
TCATATTGTTGGTTATTTTAGCAAGCATATTCCTTTCCTGCAGGAGAAGA
ACTCGTTTTACAATGTTTCCTGTATTTTAACATTGCCGCCATATCAGCGA
AAGGGTTACGGAAGATTACTCATCGATTTCATTTACAACCATTCTGCAAT
CAAATGCATCGAACTCGTCTTACTATGAAAGCTTTCTAGACCAT
BS32736.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:02:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chm-RB | 2112 | CG5229-PB | 1..2112 | 17..2128 | 10560 | 100 | Plus |
| chm-RC | 2436 | CG5229-PC | 1..2065 | 17..2081 | 10325 | 100 | Plus |
| chm-RA | 2436 | CG5229-PA | 1..2065 | 17..2081 | 10325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:02:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chm-RB | 2422 | CG5229-RB | 91..2202 | 17..2128 | 10560 | 100 | Plus |
| chm-RC | 3302 | CG5229-RC | 91..2155 | 17..2081 | 10325 | 100 | Plus |
| chm-RA | 2955 | CG5229-RA | 91..2155 | 17..2081 | 10325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:02:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7412507..7413311 | 17..821 | 4025 | 100 | Plus |
| 2L | 23513712 | 2L | 7413380..7414009 | 817..1446 | 3150 | 100 | Plus |
| 2L | 23513712 | 2L | 7414292..7414664 | 1603..1975 | 1865 | 100 | Plus |
| 2L | 23513712 | 2L | 7414072..7414231 | 1443..1602 | 800 | 100 | Plus |
| 2L | 23513712 | 2L | 7417371..7417478 | 1974..2081 | 540 | 100 | Plus |
| 2L | 23513712 | 2L | 7417547..7417593 | 2082..2128 | 235 | 100 | Plus |
| 2R | 25286936 | 2R | 24102385..24102459 | 1850..1924 | 195 | 84 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:02:19 has no hits.
BS32736.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:25:08 Download gff for
BS32736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chm-RB | 91..2201 | 17..2127 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:29:55 Download gff for
BS32736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chm-RB | 91..2201 | 17..2127 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:29:55 Download gff for
BS32736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7412507..7413308 | 17..818 | 100 | -> | Plus |
| 2L | 7413382..7414007 | 819..1444 | 100 | -> | Plus |
| 2L | 7414074..7414231 | 1445..1602 | 100 | -> | Plus |
| 2L | 7414292..7414664 | 1603..1975 | 100 | -> | Plus |
| 2L | 7417373..7417478 | 1976..2081 | 100 | -> | Plus |
| 2L | 7417547..7417592 | 2082..2127 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:25:08 Download gff for
BS32736.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7412507..7413308 | 17..818 | 100 | -> | Plus |
| arm_2L | 7413382..7414007 | 819..1444 | 100 | -> | Plus |
| arm_2L | 7414074..7414231 | 1445..1602 | 100 | -> | Plus |
| arm_2L | 7414292..7414664 | 1603..1975 | 100 | -> | Plus |
| arm_2L | 7417373..7417478 | 1976..2081 | 100 | -> | Plus |
| arm_2L | 7417547..7417592 | 2082..2127 | 100 | | Plus |
BS32736.pep Sequence
Translation from 16 to 2127
> BS32736.pep
MALESGSSSSESGSSSTSGSTSSETGSSSDTDSSSATPEEKPSTNSSAKS
QTQTQQQTNSGNAQRRKPVPAASEDKPKPSVAPSSKKVNNPPKSKLSSDD
DEYEDSAPPAKKNSRAMGSSTVTAAAAASAARRKPPASVNKPSNPANKPS
NPTQRSANNNTNRSLENGEGKRPSLSSSSNSTDDSMKIVKNGRKVPLKMA
STVRPKQIRGKLPPAKKNGGGPVISSDGSSGSESGSNSGDESSSGSESEG
SDSSNSYSSQPVKGGAKGKRSGPTKIQNSDSEEERKDKANPMRKLTRSLS
MRRTKQQPKQETDSESDGDLEDDKIMISKSPAKKPAPSNLNASKSKVKRE
PIGISSGVLSSIKSRPVSPITQTEKKCPIEGCDSSGHLSGNLDKHFLPEA
CPIYHNMSASECKERANERKLRNEQRLKMPVNIVTAPGNQNTNLKTLSPE
QREFLAKIRESRANFKPANNNFLDSKVKLEKDVTDEDREPNLAGLVPDYD
LQLFREAQAQASERIEDELKDLPVGKGIKYISMGKYKMKVWYQSPYPDDA
ARLPKMYICEFCLRYQKSETGIKRHAEKCVWRHPPGDEIYRKGKLQVWQV
DGKRYKQYCQHLCLLAKFFLDHKTLYYDVEPFLFYIMTLADVDGCHIVGY
FSKHIPFLQEKNSFYNVSCILTLPPYQRKGYGRLLIDFIYNHSAIKCIEL
VLL*
BS32736.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:01:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chm-PB | 703 | CG5229-PB | 1..703 | 1..703 | 3644 | 100 | Plus |
| chm-PC | 811 | CG5229-PC | 1..690 | 1..690 | 3573 | 99.9 | Plus |
| chm-PA | 811 | CG5229-PA | 1..690 | 1..690 | 3573 | 99.9 | Plus |
| enok-PB | 2291 | CG11290-PB | 319..870 | 152..690 | 614 | 30.6 | Plus |
| enok-PA | 2291 | CG11290-PA | 319..870 | 152..690 | 614 | 30.6 | Plus |
