BS32738.complete Sequence
1130 bp assembled on 2014-01-22
GenBank Submission: KX800595
> BS32738.complete
GAAGTTATCAGTCGACATGTCGCAACAGCGCTCCACAGAGCAGATTGCAG
CTAGCAACAACAACACCAGCGATGTAATAGCGCTGGACGACGACGAGGAT
ACGGATGTGCAATTCGTTGCAGCTCTGCGTCCCACCGCACCAGTCATCGA
TCTTTGCGTCTCGCCCTCCACTTCTGCTGCTGCTGCTGCGGCGGCGGCAG
CTGCAGCCCACTCAGGAGGCGGAAGTGGCGAGGATCCGGCGGTTGGATCC
GCATCTGGAGCTGCTGCTTCGGATACCGATTCACTTGCTTCTTCGCCTGA
CGAAGGAGCGTTAGCCACCGGTGTGGATGCAGCGGCAGCCGTTTCTGGCG
AAGATTCCCCCTCTGCAGCGGCCGCTGCCTTGGAGTGTCCCATCTGTTTG
CAAACCTGCATCCACCCAGCTCGTCTCCCCTGTGGCCACATCTTCTGCTT
TTTGTGCGTGAAGGGTGTTGCTTATAAGAACCGCCGTTGTGCTATGTGCC
GTCGCGAGATTCCCGCCGAGTTCCTGGACCATCCCCAGCTGGTGAATGGC
ATTGAGGACATCTGCACCACTCGCGCGACCGAGGACGGCTTCCAGTGGTA
TTACGAGGGAAGAAACGGGGGCTGGTGGGCGTACGATTCTCGGACCAATG
CAGACATCGAGATCGCCTATGCTGGCTTTGAGATATTCAAGGCAGATAAC
CCTGAGCTTGCTCCTTTATTTGATCGGGACTGTCCAAACCCTATCAATCA
CTATTGTCTGTGTGACGAAAATATTATTTTCTACAATGCCGATTCAGAAA
TTGTTATATACCCAACCATTATTCGTTCATCTGGTCAGGGCGCTCCAGCC
TCTTCCGAAAACAATGGTCGGGACTCGCCAGCCCTATCATTGGACGATAT
TATGAGCTTAGACCCCGATGAGCTGAACATCATTAGGCCGCATCCATGCA
CACTGCCCATTCAGATCTGCGGGCGTATGTACATCATCGACTTTTTGCAG
AATTTACAGTATCTCCGCTTGACTCCAGAAAAGAGCCGCAATATAATGCG
CTGCAAGAGCACGGATGACGTTTCTGGCGGAATGAGAGGAGTTGCTGGAC
TGAGCCAGAACTAAAAGCTTTCTAGACCAT
BS32738.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:44:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8786-RF | 1098 | CG8786-PF | 1..1098 | 17..1114 | 5490 | 100 | Plus |
| CG8786-RG | 1347 | CG8786-PG | 1..602 | 17..618 | 3010 | 100 | Plus |
| CG8786-RC | 1347 | CG8786-PC | 1..602 | 17..618 | 3010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:44:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8786-RF | 1376 | CG8786-RF | 149..1249 | 16..1116 | 5505 | 100 | Plus |
| CG8786-RG | 3862 | CG8786-RG | 149..751 | 16..618 | 3015 | 100 | Plus |
| CG8786-RC | 1667 | CG8786-RC | 149..751 | 16..618 | 3015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:44:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19640486..19640985 | 1116..617 | 2500 | 100 | Minus |
| 3L | 28110227 | 3L | 19642352..19642668 | 332..16 | 1585 | 100 | Minus |
| 3L | 28110227 | 3L | 19641064..19641220 | 618..462 | 785 | 100 | Minus |
| 3L | 28110227 | 3L | 19641893..19642026 | 464..331 | 670 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 14:44:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2467 | 340..175 | 112 | 53 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2767..2864 | 268..168 | 110 | 59.4 | Minus |
BS32738.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:36 Download gff for
BS32738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8786-RF | 150..1245 | 17..1112 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:40 Download gff for
BS32738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8786-RF | 150..1245 | 17..1112 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:40 Download gff for
BS32738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19640490..19640984 | 618..1112 | 100 | <- | Minus |
| 3L | 19641065..19641218 | 464..617 | 100 | <- | Minus |
| 3L | 19641894..19642024 | 333..463 | 100 | <- | Minus |
| 3L | 19642352..19642667 | 17..332 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:36 Download gff for
BS32738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19633590..19634084 | 618..1112 | 100 | <- | Minus |
| arm_3L | 19634165..19634318 | 464..617 | 100 | <- | Minus |
| arm_3L | 19634994..19635124 | 333..463 | 100 | <- | Minus |
| arm_3L | 19635452..19635767 | 17..332 | 100 | | Minus |
BS32738.pep Sequence
Translation from 16 to 1113
> BS32738.pep
MSQQRSTEQIAASNNNTSDVIALDDDEDTDVQFVAALRPTAPVIDLCVSP
STSAAAAAAAAAAAHSGGGSGEDPAVGSASGAAASDTDSLASSPDEGALA
TGVDAAAAVSGEDSPSAAAAALECPICLQTCIHPARLPCGHIFCFLCVKG
VAYKNRRCAMCRREIPAEFLDHPQLVNGIEDICTTRATEDGFQWYYEGRN
GGWWAYDSRTNADIEIAYAGFEIFKADNPELAPLFDRDCPNPINHYCLCD
ENIIFYNADSEIVIYPTIIRSSGQGAPASSENNGRDSPALSLDDIMSLDP
DELNIIRPHPCTLPIQICGRMYIIDFLQNLQYLRLTPEKSRNIMRCKSTD
DVSGGMRGVAGLSQN*
BS32738.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8786-PF | 365 | CG8786-PF | 1..365 | 1..365 | 1929 | 100 | Plus |
| CG8786-PB | 376 | CG8786-PB | 1..217 | 1..218 | 1096 | 96.8 | Plus |
| CG8786-PG | 448 | CG8786-PG | 1..217 | 1..218 | 1096 | 96.8 | Plus |
| CG8786-PC | 448 | CG8786-PC | 1..217 | 1..218 | 1096 | 96.8 | Plus |
