Clone BS32743 Report

Search the DGRC for BS32743

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:327
Well:43
Vector:pDNR-Dual
Associated Gene/TranscriptCG34216-RB
Protein status:BS32743.pep: full length peptide match
Sequenced Size:1043

Clone Sequence Records

BS32743.complete Sequence

1043 bp assembled on 2014-01-22

GenBank Submission: KX803839

> BS32743.complete
GAAGTTATCAGTCGACATGTGCATCCACTGCTGTCGCCTCCGCCGGACAC
CATGTCCACCGATTCCCTACAGCTGTCCACACTGCCCGGTGCGCACCATC
TCCAGCTGCTGTCCACTGGGCAGTCGGCCCCTCGCCGAGAATCCTTTCAT
AAGAGGTCCGGATCGGGAGCCAACCCCCGATCCCTGCGACACCTTGCCAC
CGCGCTGGCTGGACCTCAATCGACGGGTCATATTTGCCTTGGCAAAAAGA
TTATGTCGATCTCCAGAGGCAGCTCATTATATTTTGCTTCGCCTGTTGTA
TGCCAACTATAGAAAAGTGATGATGATATCCAGAAAACGAAGGAGATACA
AGGTGCCACTAAGTGGGTTTCCCGATCAGGATTTGTTCTCCGCCAGCGCA
CATTTCGATAGCAATGGTTACCTCTCCGATCCCATGGCTCCCGAAACTCT
GGGAAAGCTACTCCACATGATGCAGGACTACATCCTTCGGCTGAGAGCGC
TGAATCGCAAGTACAAGTGGTGTGGCAACGGCGAGGACTTTGGAGATGTA
TTGCTCCTATTGGGAGAGCAAGACGAACTGGTACGATTGTTAAGAGATCT
CTTTGGAGACAGCGATGTTGTGTCCATTCCAAAGCTCCTGAGCGCCCTTA
GCGAGCTGGAAATCAATAATTTATACGGAAAGTACAAGAAGAAAACAGTT
CCCTTTATGGTGAGAAGTATATCTGATCTCTACTCCGAAGTGACGGAACC
AAAGAGTCCAGTTTTGATATCATTAGCGCACATAGCCAACAAAGGAGTTT
CCCCTTATGGACCGAGCCACTTGAAAAACATCTTGAATTTCAGTCCAAAG
TCCTTGCCTATGATGGGTAAACACCCACCGCCTAAAAGAAGTAAAAGTGA
AAAATGCATTCCAACATCAAAAACGAATTTAACCCAAGCAGTACAAAATA
CCCAAAAAAAATCGAATTTCAAGGAACCAGCAGACAGTACTGGGATTTTA
AGTCCAACTTCCAAGAACTTACAATAAAAGCTTTCTAGACCAT

BS32743.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:44:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG34216-RB 1011 CG34216-PB 1..1011 17..1027 5055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:45:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG34216-RB 1590 CG34216-RB 159..1169 17..1027 5055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:44:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7703927..7704937 1027..17 5055 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:44:58 has no hits.

BS32743.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:44 Download gff for BS32743.complete
Subject Subject Range Query Range Percent Splice Strand
CG34216-RB 159..1167 17..1025 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:48 Download gff for BS32743.complete
Subject Subject Range Query Range Percent Splice Strand
CG34216-RB 159..1167 17..1025 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:48 Download gff for BS32743.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7703929..7704937 17..1025 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:44 Download gff for BS32743.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3591434..3592442 17..1025 100   Minus

BS32743.pep Sequence

Translation from 16 to 1026

> BS32743.pep
MCIHCCRLRRTPCPPIPYSCPHCPVRTISSCCPLGSRPLAENPFIRGPDR
EPTPDPCDTLPPRWLDLNRRVIFALAKRLCRSPEAAHYILLRLLYANYRK
VMMISRKRRRYKVPLSGFPDQDLFSASAHFDSNGYLSDPMAPETLGKLLH
MMQDYILRLRALNRKYKWCGNGEDFGDVLLLLGEQDELVRLLRDLFGDSD
VVSIPKLLSALSELEINNLYGKYKKKTVPFMVRSISDLYSEVTEPKSPVL
ISLAHIANKGVSPYGPSHLKNILNFSPKSLPMMGKHPPPKRSKSEKCIPT
SKTNLTQAVQNTQKKSNFKEPADSTGILSPTSKNLQ*

BS32743.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG34216-PB 336 CG34216-PB 1..336 1..336 1794 100 Plus