BS32746.complete Sequence
2411 bp assembled on 2014-03-03
GenBank Submission: KX804521
> BS32746.complete
GAAGTTATCAGTCGACATGAATGTGGACTTTGCGAGGGTGTGCGGGAAGC
ACATAGGCGTCTACGAGGCCTACTACAAACTGATTGACCCCAAAGGCACA
GGGGCAATCGAGGCCATGACTGCGGCCAAGTTTCTCAAGAAGTCGGGCCT
TAGCGACGTTGTGCTAAGCAGGATCTGGGACCTGTCTGATCCGAGCGGCA
AGGGCTTTCTGGACAAGCCGGGCTTTTTTGTAGCCCTTAAGCTGGTGTCC
CTGTCGCAGGCGGGACAGGTGGCCAGCATGGCCAACATCTACCTGGACAT
TGCCAACCCGCCCAAGTTGGGTGAACTACCAAAAACGATGCCGTCGCGTA
TTCAGACTGTTCCCGTTGCTAGCGGCGGAGTGGCAAACGGAGACTGGTCC
ATCGGGGTGATCGATCGGCTCAAGTACGAGCAGCTCTTCGAGTCCCTGCA
TCCCAGTAATGGAATGCTGCCGGGCAACAAGGTTAAAGGCGTGCTCATGG
ACTCCAAGCTGCCCATGAGCATACTGGGAACTATATGGGACCTGGCCGAC
CAGGACAAGGACGGCAACCTGGATATGCACGAATTCGTGGTTGCCATGCA
CCTGGTCTACCAGACGCTGCAGAAGCGCACCATTCCTAGCGTTCTGCCGC
CCGAGCTGCGAAAGCCCGGAGGAGCAGGTCCGCCACCGAAGCCAGCCATG
CCACCACCGCCAGCGGGTGCTGCTATGCCACGTGCTCCCAGTGGGGAAGG
ATTTGGGGACGGCGGATTTGTAGCAAATTTTCCCAAGGATATAGCCCCGC
CGGCGGCTATTCCGCCGCTCCCGGTGGCTGTGCCCCCCATGACGCGCATT
CCCCCGGTGGGAGCAGTCAGCTCTCAGCCGCTGATTCAGACGGATCCATT
GATACCGATTGGGGCTCCGGTGATGGCGAATGCCGACTGGGTTGTCACCC
CAGCGGACCTAAAGCGGTTCGAGGAGATCTTCCGGCAATCGGATCTGGAT
AAGGACGGCCTGGTCTCCGGCCTTGAGGTGAAGGATATTTTCATCAAGTC
GGGTATTCCGCAGCGAAGCCTAGCAGACATCTGGGCTCTTTGTGACACCA
ATCAGTCCGGTAAGCTGACTGTGGAGCAGTTTGCACTGGCCATGTGGTTC
GTGGAGCGAAAGCAGCGCGGTGTGGACCCGCCACATGTCCTCAACGCCAA
TATGGTGCCGCCCTCAATGCGCGCCACTGTGGCTGGAGTCGATCTGCAGC
CGCAGGAGGTCAAGCCCACTTACTCAAACCCGGAGCTGGAAATGATCTCC
AAGGAGATTGAGGAGTTGGCCCGTGAGCGGCGGGTTCTGGAGACGGAGAT
TGCCCAAAAGGAAGCGGATGTGCGCATCAAAAACGGCGAAGTGCGCAGTT
TGCAGAGTGAACTGGATACTCTTACCGCCACACTGAAGCAGCTGGAGAAC
CAGCGAGGAGAGGCCCAGAAGCGACTGGATGACCTGCAGGCTCAAGTGAC
CAAGATTCGCGACCAGTGCCACATGCAGGAGGTGACCATCAACGAGCAGG
AGGGCGAATTAAACGCAAAACGCTCGGAGCTGCAGAAGCTCAAGGACGAA
GAAGCTTCGTTGCAAAAGGAGTACGACAGCAACAATCGGGAGTTATCCAA
GCTAACCAACCACCTGCAGGCAACCCAACTGCAAATCAGCTCGGTCCGAT
CAATGGTCACACAGCTGCTGGAGACGCAGCGACAGATGACCGACGCTTTG
CTCATTTGTCGGGCTGCCATGGAGAACCAAAACGCGGAACTCGTATCCGA
ATACCAGTTGAAGATAGAGCCGGACTTTGATGAGGCGCGCAAGACCCTGA
CAAAGGAAGTGCAACTGCCCAAGGATGATCCCTTTGAGGAGAACAACAGC
GGCGCCGCCAATCAAGCTACCAACGGCTTTGGCAGCGATCCCTTCTCCGG
TCAGCCGGTCAACAAGCCGGCTATTTCTACAGGCTTTGATGACAGCTTCA
ACATGAGCTCAGGCTTCGATAGTGGCTTCGATGCCTTTGGTCAGAGCGGA
GCGGGCTCAGCCTTTGGTCAGACCCAGCGGGATCCATTCGGCTCGGATGC
CTTTGCAGCCAACAAGAGCAACGCCATTACTCCTGAGCCCGGCAAGGACG
ACTTCGGCAGTGATCCGTTTGCTGCCTTGCATGCTCCAACCGGCCAGGGT
CAGGTGCTCAGTCCCAACGCCCAGAAGTCCGGACCGCCGCCCAGACCGGA
GTCTCCTAGTCCAGCATTGCCGCCAAAGAAGTCCAAGGTGCCGCCCCCAC
GACCAGCGCCACCACGAGCAGCCCAGCCCACGGGTGGTTTCGGAAGCGGC
GGCGGAGGAGGATTTGCCGACTTTGACGACTTCGACAATAAGTGAAAGCT
TTCTAGACCAT
BS32746.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:02:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eps-15-RD | 2379 | CG16932-PD | 1..2379 | 17..2395 | 11895 | 100 | Plus |
| Eps-15-RB | 3699 | CG16932-PB | 1..2376 | 17..2392 | 11880 | 100 | Plus |
| Eps-15-RC | 3321 | CG16932-PC | 1..2376 | 17..2392 | 11880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:02:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eps-15-RD | 3695 | CG16932-RD | 292..2672 | 16..2396 | 11905 | 100 | Plus |
| Eps-15-RB | 4358 | CG16932-RB | 292..2668 | 16..2392 | 11885 | 100 | Plus |
| Eps-15-RC | 3980 | CG16932-RC | 292..2668 | 16..2392 | 11885 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:02:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24773741..24774506 | 1084..319 | 3830 | 100 | Minus |
| 2R | 25286936 | 2R | 24772098..24772542 | 2137..1693 | 2225 | 100 | Minus |
| 2R | 25286936 | 2R | 24773362..24773684 | 1405..1083 | 1615 | 100 | Minus |
| 2R | 25286936 | 2R | 24774576..24774814 | 320..82 | 1195 | 100 | Minus |
| 2R | 25286936 | 2R | 24772596..24772795 | 1695..1496 | 1000 | 100 | Minus |
| 2R | 25286936 | 2R | 24771849..24772039 | 2326..2136 | 955 | 100 | Minus |
| 2R | 25286936 | 2R | 24773210..24773304 | 1497..1403 | 475 | 100 | Minus |
| 2R | 25286936 | 2R | 24771725..24771794 | 2392..2323 | 350 | 100 | Minus |
| 2R | 25286936 | 2R | 24774908..24774974 | 82..16 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 15:02:38 has no hits.
BS32746.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:25:16 Download gff for
BS32746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eps-15-RD | 293..2670 | 17..2394 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:30:02 Download gff for
BS32746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eps-15-RD | 293..2670 | 17..2394 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:30:02 Download gff for
BS32746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24773212..24773299 | 1408..1495 | 100 | <- | Minus |
| 2R | 24774577..24774813 | 83..319 | 100 | <- | Minus |
| 2R | 24774908..24774973 | 17..82 | 100 | | Minus |
| 2R | 24771724..24771790 | 2327..2394 | 98 | <- | Minus |
| 2R | 24771849..24772037 | 2138..2326 | 100 | <- | Minus |
| 2R | 24772098..24772541 | 1694..2137 | 100 | <- | Minus |
| 2R | 24772598..24772795 | 1496..1693 | 100 | <- | Minus |
| 2R | 24773358..24773683 | 1084..1407 | 99 | <- | Minus |
| 2R | 24773742..24774505 | 320..1083 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:25:16 Download gff for
BS32746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20659247..20659313 | 2327..2394 | 98 | <- | Minus |
| arm_2R | 20659372..20659560 | 2138..2326 | 100 | <- | Minus |
| arm_2R | 20659621..20660064 | 1694..2137 | 100 | <- | Minus |
| arm_2R | 20660121..20660318 | 1496..1693 | 100 | <- | Minus |
| arm_2R | 20660735..20660822 | 1408..1495 | 100 | <- | Minus |
| arm_2R | 20660881..20661206 | 1084..1407 | 99 | <- | Minus |
| arm_2R | 20661265..20662028 | 320..1083 | 100 | <- | Minus |
| arm_2R | 20662100..20662336 | 83..319 | 100 | <- | Minus |
| arm_2R | 20662431..20662496 | 17..82 | 100 | | Minus |
BS32746.pep Sequence
Translation from 16 to 2394
> BS32746.pep
MNVDFARVCGKHIGVYEAYYKLIDPKGTGAIEAMTAAKFLKKSGLSDVVL
SRIWDLSDPSGKGFLDKPGFFVALKLVSLSQAGQVASMANIYLDIANPPK
LGELPKTMPSRIQTVPVASGGVANGDWSIGVIDRLKYEQLFESLHPSNGM
LPGNKVKGVLMDSKLPMSILGTIWDLADQDKDGNLDMHEFVVAMHLVYQT
LQKRTIPSVLPPELRKPGGAGPPPKPAMPPPPAGAAMPRAPSGEGFGDGG
FVANFPKDIAPPAAIPPLPVAVPPMTRIPPVGAVSSQPLIQTDPLIPIGA
PVMANADWVVTPADLKRFEEIFRQSDLDKDGLVSGLEVKDIFIKSGIPQR
SLADIWALCDTNQSGKLTVEQFALAMWFVERKQRGVDPPHVLNANMVPPS
MRATVAGVDLQPQEVKPTYSNPELEMISKEIEELARERRVLETEIAQKEA
DVRIKNGEVRSLQSELDTLTATLKQLENQRGEAQKRLDDLQAQVTKIRDQ
CHMQEVTINEQEGELNAKRSELQKLKDEEASLQKEYDSNNRELSKLTNHL
QATQLQISSVRSMVTQLLETQRQMTDALLICRAAMENQNAELVSEYQLKI
EPDFDEARKTLTKEVQLPKDDPFEENNSGAANQATNGFGSDPFSGQPVNK
PAISTGFDDSFNMSSGFDSGFDAFGQSGAGSAFGQTQRDPFGSDAFAANK
SNAITPEPGKDDFGSDPFAALHAPTGQGQVLSPNAQKSGPPPRPESPSPA
LPPKKSKVPPPRPAPPRAAQPTGGFGSGGGGGFADFDDFDNK*
BS32746.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:01:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eps-15-PD | 792 | CG16932-PD | 1..792 | 1..792 | 4110 | 100 | Plus |
| Eps-15-PB | 1232 | CG16932-PB | 1..792 | 1..792 | 4110 | 100 | Plus |
| Eps-15-PC | 1106 | CG16932-PC | 1..792 | 1..792 | 4110 | 100 | Plus |
| Eps-15-PA | 1253 | CG16932-PA | 1..813 | 1..792 | 4078 | 97.4 | Plus |
| Dap160-PD | 1190 | CG1099-PD | 8..514 | 127..593 | 427 | 25.8 | Plus |
