Clone BS32749 Report

Search the DGRC for BS32749

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:327
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG13707-RC
Protein status:BS32749.pep: full length peptide match
Sequenced Size:335

Clone Sequence Records

BS32749.complete Sequence

335 bp assembled on 2014-01-22

GenBank Submission: KX803747

> BS32749.complete
GAAGTTATCAGTCGACATGCAGCGCCTGGACAGGATGATCGAGGCTCTGC
GGGACTATAGCGGACCCACGATATGCCACGAGTGGCCCTATCCCCTTATC
TTCAAAGGCACAATCGACGAGGCACATGTCGCACAAATACTCAATGCCAG
CGAACTGGATTTGGATACGAAGTTGGTCAAGGTGTCCGGCGGAAGGAACT
GCATCCATGTGGAATCCGATGTGGTCACAGCTCAAAGGCGCTCCAGATTG
CTGTGGTTCTCCAGAAGAAGCAGGGGGAAACGAGCTGAGCGCTTAAAGGA
ACCTAATCCTGTAGTTTGAAAGCTTTCTAGACCAT

BS32749.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:45:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG13707-RB 492 CG13707-PB 190..492 17..319 1515 100 Plus
CG13707-RD 303 CG13707-PD 1..303 17..319 1515 100 Plus
CG13707-RC 303 CG13707-PC 1..303 17..319 1515 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:45:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG13707-RB 988 CG13707-RB 398..700 17..319 1515 100 Plus
CG13707-RD 2106 CG13707-RD 1516..1818 17..319 1515 100 Plus
CG13707-RC 1252 CG13707-RC 662..964 17..319 1515 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:45:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4838079..4838381 319..17 1515 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:45:12 has no hits.

BS32749.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:49 Download gff for BS32749.complete
Subject Subject Range Query Range Percent Splice Strand
CG13707-RC 662..963 17..318 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:56 Download gff for BS32749.complete
Subject Subject Range Query Range Percent Splice Strand
CG13707-RC 662..963 17..318 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:56 Download gff for BS32749.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4838080..4838381 17..318 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:49 Download gff for BS32749.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4838080..4838381 17..318 100   Minus

BS32749.pep Sequence

Translation from 16 to 318

> BS32749.pep
MQRLDRMIEALRDYSGPTICHEWPYPLIFKGTIDEAHVAQILNASELDLD
TKLVKVSGGRNCIHVESDVVTAQRRSRLLWFSRRSRGKRAERLKEPNPVV
*

BS32749.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG13707-PD 100 CG13707-PD 1..100 1..100 522 100 Plus
CG13707-PC 100 CG13707-PC 1..100 1..100 522 100 Plus
CG13707-PB 163 CG13707-PB 64..163 1..100 522 100 Plus