Clone BS32750 Report

Search the DGRC for BS32750

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:327
Well:50
Vector:pDNR-Dual
Associated Gene/Transcriptbbc-RD
Protein status:BS32750.pep: full length peptide match
Sequenced Size:764

Clone Sequence Records

BS32750.complete Sequence

764 bp assembled on 2014-01-22

GenBank Submission: KX802284

> BS32750.complete
GAAGTTATCAGTCGACATGCGGTTCGGCAGAATTGATGTGACAGAGGCTC
AGTTCTCAATTATAGCCATTCATTTGGTTTCGGCTGCACTGGGTCCTGAG
ATCTGGCTCACCAAGATACCAATCGTGGGCCTTTCATGGAATTACACAAT
ATTAGTATTTATCACATTCGGTTATACCTTGAATATAATCAATTTCCTAA
AAATGTTTACTCAAGGCGGCAGTGGCAAAAACGGCTCCTCAGTTGCTGGC
ACCAGTGTCCTCTCGCCCAGCATTCCGCTCACGCTGGTGGTGCTGCCCGC
CCTGATGATTGCCCAGAAGTCGCCGCAGAACCTCTTCACCGAGCACGCAT
CGGTGTACATCATGGCGTTCGGCATGGTGGCCGCCAAGGTCACCAATAAG
CTGGTGATCGCTCACATGACCAAGGCGGAGATGGAGTATCTGGACTGGTC
GCTGCTCGGCCCCTCGCTGCTGTTCCTCAACCAGTACTTCAACTGCATCG
TGCCAGAGATCTGGCTACTGTGGTTCACGCTCATCTGGGGCACCCAGGAT
CTGCTGCGCTACTGCGCCCAGGTGTGCCTCGAGATTTGCCAGCACCTGCG
CATCGATCTCTTCCGGATACCGTACACGCCCAAAGGCGCGACCCCGCATC
CAGCCACCGCATCGGTGAGCAGCCAGAGCAACTTTGGCAGCAGTGCGGAC
AAGAACGGTGGCAGCGCGCATCGAAAGTCGAAGAGCAAACCGCACTAGAA
GCTTTCTAGACCAT

BS32750.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
bbc-RA 1254 CG6016-PA 523..1254 17..748 3660 100 Plus
bbc-RB 1254 CG6016-PB 729..1254 223..748 2585 99.4 Plus
bbc-RC 1254 CG6016-PC 730..1254 224..748 2565 99.2 Plus
bbc-RB 1254 CG6016-PB 523..623 17..117 505 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
bbc-RA 2031 CG6016-RA 914..1645 17..748 3660 100 Plus
bbc-RB 2579 CG6016-RB 1120..1645 223..748 2585 99.4 Plus
bbc-RC 2579 CG6016-RC 1121..1645 224..748 2565 99.2 Plus
bbc-RB 2579 CG6016-RB 914..1014 17..117 505 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13487568..13487910 748..406 1715 100 Minus
2R 25286936 2R 13487974..13488132 406..248 795 100 Minus
2R 25286936 2R 13489741..13489875 248..114 675 100 Minus
2R 25286936 2R 13491435..13491533 115..17 495 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:45:15 has no hits.

BS32750.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:51 Download gff for BS32750.complete
Subject Subject Range Query Range Percent Splice Strand
bbc-RA 914..1645 17..748 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:57 Download gff for BS32750.complete
Subject Subject Range Query Range Percent Splice Strand
bbc-RA 914..1645 17..748 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:57 Download gff for BS32750.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13487568..13487909 407..748 100 <- Minus
2R 13487974..13488132 248..406 100 <- Minus
2R 13489742..13489873 116..247 100 <- Minus
2R 13491435..13491533 17..115 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:51 Download gff for BS32750.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9375073..9375414 407..748 100 <- Minus
arm_2R 9375479..9375637 248..406 100 <- Minus
arm_2R 9377247..9377378 116..247 100 <- Minus
arm_2R 9378940..9379038 17..115 100   Minus

BS32750.pep Sequence

Translation from 16 to 747

> BS32750.pep
MRFGRIDVTEAQFSIIAIHLVSAALGPEIWLTKIPIVGLSWNYTILVFIT
FGYTLNIINFLKMFTQGGSGKNGSSVAGTSVLSPSIPLTLVVLPALMIAQ
KSPQNLFTEHASVYIMAFGMVAAKVTNKLVIAHMTKAEMEYLDWSLLGPS
LLFLNQYFNCIVPEIWLLWFTLIWGTQDLLRYCAQVCLEICQHLRIDLFR
IPYTPKGATPHPATASVSSQSNFGSSADKNGGSAHRKSKSKPH*

BS32750.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
bbc-PA 417 CG6016-PA 175..417 1..243 1267 100 Plus
bbc-PC 417 CG6016-PC 175..417 1..243 1080 86.9 Plus
bbc-PB 417 CG6016-PB 175..417 1..243 1079 87.7 Plus
bbc-PE 373 CG6016-PE 175..373 1..243 984 81.9 Plus