BS32750.complete Sequence
764 bp assembled on 2014-01-22
GenBank Submission: KX802284
> BS32750.complete
GAAGTTATCAGTCGACATGCGGTTCGGCAGAATTGATGTGACAGAGGCTC
AGTTCTCAATTATAGCCATTCATTTGGTTTCGGCTGCACTGGGTCCTGAG
ATCTGGCTCACCAAGATACCAATCGTGGGCCTTTCATGGAATTACACAAT
ATTAGTATTTATCACATTCGGTTATACCTTGAATATAATCAATTTCCTAA
AAATGTTTACTCAAGGCGGCAGTGGCAAAAACGGCTCCTCAGTTGCTGGC
ACCAGTGTCCTCTCGCCCAGCATTCCGCTCACGCTGGTGGTGCTGCCCGC
CCTGATGATTGCCCAGAAGTCGCCGCAGAACCTCTTCACCGAGCACGCAT
CGGTGTACATCATGGCGTTCGGCATGGTGGCCGCCAAGGTCACCAATAAG
CTGGTGATCGCTCACATGACCAAGGCGGAGATGGAGTATCTGGACTGGTC
GCTGCTCGGCCCCTCGCTGCTGTTCCTCAACCAGTACTTCAACTGCATCG
TGCCAGAGATCTGGCTACTGTGGTTCACGCTCATCTGGGGCACCCAGGAT
CTGCTGCGCTACTGCGCCCAGGTGTGCCTCGAGATTTGCCAGCACCTGCG
CATCGATCTCTTCCGGATACCGTACACGCCCAAAGGCGCGACCCCGCATC
CAGCCACCGCATCGGTGAGCAGCCAGAGCAACTTTGGCAGCAGTGCGGAC
AAGAACGGTGGCAGCGCGCATCGAAAGTCGAAGAGCAAACCGCACTAGAA
GCTTTCTAGACCAT
BS32750.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:45:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bbc-RA | 1254 | CG6016-PA | 523..1254 | 17..748 | 3660 | 100 | Plus |
bbc-RB | 1254 | CG6016-PB | 729..1254 | 223..748 | 2585 | 99.4 | Plus |
bbc-RC | 1254 | CG6016-PC | 730..1254 | 224..748 | 2565 | 99.2 | Plus |
bbc-RB | 1254 | CG6016-PB | 523..623 | 17..117 | 505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:45:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bbc-RA | 2031 | CG6016-RA | 914..1645 | 17..748 | 3660 | 100 | Plus |
bbc-RB | 2579 | CG6016-RB | 1120..1645 | 223..748 | 2585 | 99.4 | Plus |
bbc-RC | 2579 | CG6016-RC | 1121..1645 | 224..748 | 2565 | 99.2 | Plus |
bbc-RB | 2579 | CG6016-RB | 914..1014 | 17..117 | 505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:45:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13487568..13487910 | 748..406 | 1715 | 100 | Minus |
2R | 25286936 | 2R | 13487974..13488132 | 406..248 | 795 | 100 | Minus |
2R | 25286936 | 2R | 13489741..13489875 | 248..114 | 675 | 100 | Minus |
2R | 25286936 | 2R | 13491435..13491533 | 115..17 | 495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:45:15 has no hits.
BS32750.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:51 Download gff for
BS32750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bbc-RA | 914..1645 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:57 Download gff for
BS32750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bbc-RA | 914..1645 | 17..748 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:57 Download gff for
BS32750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13487568..13487909 | 407..748 | 100 | <- | Minus |
2R | 13487974..13488132 | 248..406 | 100 | <- | Minus |
2R | 13489742..13489873 | 116..247 | 100 | <- | Minus |
2R | 13491435..13491533 | 17..115 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:51 Download gff for
BS32750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9375073..9375414 | 407..748 | 100 | <- | Minus |
arm_2R | 9375479..9375637 | 248..406 | 100 | <- | Minus |
arm_2R | 9377247..9377378 | 116..247 | 100 | <- | Minus |
arm_2R | 9378940..9379038 | 17..115 | 100 | | Minus |
BS32750.pep Sequence
Translation from 16 to 747
> BS32750.pep
MRFGRIDVTEAQFSIIAIHLVSAALGPEIWLTKIPIVGLSWNYTILVFIT
FGYTLNIINFLKMFTQGGSGKNGSSVAGTSVLSPSIPLTLVVLPALMIAQ
KSPQNLFTEHASVYIMAFGMVAAKVTNKLVIAHMTKAEMEYLDWSLLGPS
LLFLNQYFNCIVPEIWLLWFTLIWGTQDLLRYCAQVCLEICQHLRIDLFR
IPYTPKGATPHPATASVSSQSNFGSSADKNGGSAHRKSKSKPH*
BS32750.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bbc-PA | 417 | CG6016-PA | 175..417 | 1..243 | 1267 | 100 | Plus |
bbc-PC | 417 | CG6016-PC | 175..417 | 1..243 | 1080 | 86.9 | Plus |
bbc-PB | 417 | CG6016-PB | 175..417 | 1..243 | 1079 | 87.7 | Plus |
bbc-PE | 373 | CG6016-PE | 175..373 | 1..243 | 984 | 81.9 | Plus |