BS32752.complete Sequence
392 bp assembled on 2014-01-22
GenBank Submission: KX802582
> BS32752.complete
GAAGTTATCAGTCGACATGAGCAAAGCCAAGTCAACCGCCCACGAGCCGA
CGATCCACTACCTGGACAGCGTGCTGAGCGATGAGGAGAAGCGGTGCGCC
TATGGCCACCAGTGGCGCAACTTCTCCATCTCCCGATCCGGACGCTTTCG
TTCGAAGAACAAGAAGCGGGATGCGGTCGACGGAAAGTTCTTTGACGGAG
GATCTGGATCAGGATCTCTGCAGGACTTCGAGAAGGTCTCAAATTGCACT
TCGAAAAGCACAATATCCAAGTGCCTCGACCCTGCGACAGGACCGATGAC
GCCTGCAGCTAATCAGACAAGAAGCCAACGTGACCAGGTTGAGAGCTATA
AAAGTGTTTACGAAACGAATTTATAGAAGCTTTCTAGACCAT
BS32752.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:45:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34112-RB | 360 | CG34112-PB | 1..360 | 17..376 | 1800 | 100 | Plus |
| CG34112-RD | 291 | CG34112-PD | 1..221 | 17..237 | 1105 | 100 | Plus |
| CG34112-RC | 291 | CG34112-PC | 1..221 | 17..237 | 1105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:45:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34112-RB | 970 | CG34112-RB | 213..574 | 16..377 | 1810 | 100 | Plus |
| CG34112-RD | 1139 | CG34112-RD | 213..434 | 16..237 | 1110 | 100 | Plus |
| CG34112-RC | 1094 | CG34112-RC | 213..434 | 16..237 | 1110 | 100 | Plus |
| CG34112-RD | 1139 | CG34112-RD | 602..743 | 236..377 | 710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:45:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4393826..4394047 | 237..16 | 1110 | 100 | Minus |
| 3R | 32079331 | 3R | 4392107..4392251 | 377..233 | 725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:45:19 has no hits.
BS32752.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:53 Download gff for
BS32752.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34112-RB | 214..573 | 17..376 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:58 Download gff for
BS32752.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34112-RB | 214..573 | 17..376 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:58 Download gff for
BS32752.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4393828..4394046 | 17..235 | 100 | | Minus |
| 3R | 4392108..4392248 | 236..376 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:53 Download gff for
BS32752.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 217830..217970 | 236..376 | 100 | <- | Minus |
| arm_3R | 219550..219768 | 17..235 | 100 | | Minus |
BS32752.pep Sequence
Translation from 16 to 375
> BS32752.pep
MSKAKSTAHEPTIHYLDSVLSDEEKRCAYGHQWRNFSISRSGRFRSKNKK
RDAVDGKFFDGGSGSGSLQDFEKVSNCTSKSTISKCLDPATGPMTPAANQ
TRSQRDQVESYKSVYETNL*
BS32752.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34112-PB | 119 | CG34112-PB | 1..119 | 1..119 | 626 | 100 | Plus |
| CG34112-PD | 96 | CG34112-PD | 1..74 | 1..74 | 392 | 100 | Plus |
| CG34112-PC | 96 | CG34112-PC | 1..74 | 1..74 | 392 | 100 | Plus |
| CG34112-PA | 80 | CG34112-PA | 1..73 | 1..73 | 388 | 100 | Plus |
