BS32754.complete Sequence
734 bp assembled on 2014-01-22
GenBank Submission: KX803622
> BS32754.complete
GAAGTTATCAGTCGACATGATCTACGCAATTCTAGTGCTCTGTCTGCTGG
GCAGTTGTTGCCCAGCAATGGCCCAGAAGGTCGAAAAGGATCCGCTGGCC
AAGGAACAAAATACCCGTTTGGCCGGCATCTATGTGAAGGATGGCAACGA
AAATGGCCAGCTGAGATTCCTGGCATCGGGCTTGAACAGTGGCAGCAGCA
GCACCAGCTCTTCAAACACCGGTATCAACTCGGCCCTGAATCAGTACATA
ACCAATAAGCAGGATATGCTGGAGCAACTGCGTCCCACTTCGGGCACCAC
ATCAACGGGAACGGGAGCTGTTACGGGCACATCGACGGGAACAACAGGAA
CGACTTCGGGAACCGGAACTGGCCTGGTCACCACGACTTCCAATGGAGCT
ATCTATGTGAACCTGGGCAGTTCGGGATCCTCATCATCATCGTCTTCCTC
CTCGTCGGCCACCAATGCGGCCATTAATCAGGTCATCTATGGATCCTCGC
CAGTTGCCGGTCTCTTGCCGCAGATCGTTGGCCAGGCGGTGTCCAGTCGA
GTGCGTCCCGGTGGCCAGAACAATAGGAGGCGCGTTCCCGCCCGTAGGCG
CCGGGTCAACAAGAGGCGTGGCAGCATTAACAACAACAATCAGCGACGTC
GCCGGCGTGGCAACAAGCGGGGCAAGAATAAGGCCCAGGTGATGGTGGTG
CGACCAAATCGCGGTTGAAAGCTTTCTAGACCAT
BS32754.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:45:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4116-RB | 702 | CG4116-PB | 1..702 | 17..718 | 3510 | 100 | Plus |
| CG4116-RA | 795 | CG4116-PA | 94..795 | 17..718 | 3510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:45:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4116-RB | 868 | CG4116-RB | 14..715 | 17..718 | 3510 | 100 | Plus |
| CG4116-RA | 948 | CG4116-RA | 94..795 | 17..718 | 3510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:45:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3066768..3067469 | 718..17 | 3510 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 14:45:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6840..7049 | 185..384 | 134 | 55.9 | Plus |
BS32754.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:56 Download gff for
BS32754.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4116-RA | 94..794 | 17..717 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:22:03 Download gff for
BS32754.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4116-RA | 94..794 | 17..717 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:22:03 Download gff for
BS32754.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3066769..3067469 | 17..717 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:56 Download gff for
BS32754.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2960802..2961502 | 17..717 | 100 | | Minus |
BS32754.pep Sequence
Translation from 16 to 717
> BS32754.pep
MIYAILVLCLLGSCCPAMAQKVEKDPLAKEQNTRLAGIYVKDGNENGQLR
FLASGLNSGSSSTSSSNTGINSALNQYITNKQDMLEQLRPTSGTTSTGTG
AVTGTSTGTTGTTSGTGTGLVTTTSNGAIYVNLGSSGSSSSSSSSSSATN
AAINQVIYGSSPVAGLLPQIVGQAVSSRVRPGGQNNRRRVPARRRRVNKR
RGSINNNNQRRRRRGNKRGKNKAQVMVVRPNRG*
BS32754.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4116-PB | 233 | CG4116-PB | 1..233 | 1..233 | 1167 | 100 | Plus |
| CG4116-PA | 264 | CG4116-PA | 32..264 | 1..233 | 1167 | 100 | Plus |
| CG13560-PB | 181 | CG13560-PB | 20..181 | 53..215 | 176 | 32.1 | Plus |
| CG13560-PA | 181 | CG13560-PA | 20..181 | 53..215 | 176 | 32.1 | Plus |
