BS32759.complete Sequence
887 bp assembled on 2014-01-22
GenBank Submission: KX800217
> BS32759.complete
GAAGTTATCAGTCGACATGCAGGCGATTGCGTTTCACAAACTGTTACTAC
TGCTTCCGCTGGCGTTTTATCAATCAACAAATGGTATGGAGTGGAATTAC
CTGAAGAATGGCAAGGATTGGGAGGACCTCTGCTCCTCCGGAAAACACCA
ATCGCCGATTTTGTTGGATTCTAGAACGGCGCGCAAGTGGGTCTTACCTG
GGATCACTTTCTGGCATTATTATAGGCTGCTTAAGCGTCCGTTTTACATC
AGAAACAATGGGCACTCCATTAGCTTGGACATTCCCGTGACGAGCAATGG
AAGGAAGCCCTTCATAACCGGCGGCCGTTTGAAGGGTCGTTACTATGCCG
ATGGACTTCACTTCCATTGGGGGTCCTACAAATCCCGCGGATCCGAGCAC
TTGATTAACAAGCGCCGATTCGACGCAGAAATCCATATTGTCCATCGGAA
CGAGAAGTACAGAAATATTGCACAAGCCGTCCGTCAGAAAGATGGTTTGG
CTGTTGTCGCAATCATGGTGGCTATTAAGGACAATGCGAAATCCACACCT
TTGTCCAGGCTCATGGAGGCAGTCGTACGGGTGCCGATCGAAGACTCGAA
CGCCACTGTTTTTGGCCAATCAAGCTTGGATCAGTTGATCGGAGGTGTGA
GTCACAGGGACTTCTTCACCTACGAGGGCTCACTGACCACGCCCCTCTGC
GACGAGACTGTCACCTGGATTGTTTTCACCGAGACTACGACTGTCACCAT
GTCATCCGTCTCAAAGTTTTGGCTGTTGCGAGACCACTGGGGCCACAGGC
TGATCAACAATTATCGGATTGTCCAAGATCTAAACAATCGCACTGTGTTC
TATAAGAAGAGAATGTCATAAAAGCTTTCTAGACCAT
BS32759.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:45:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18672-RB | 855 | CG18672-PB | 1..855 | 17..871 | 4275 | 100 | Plus |
CG18672-RC | 861 | CG18672-PC | 1..861 | 17..871 | 4180 | 99.3 | Plus |
CG18672-RD | 846 | CG18672-PD | 1..846 | 17..871 | 4105 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:45:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18672-RB | 1036 | CG18672-RB | 161..1018 | 17..874 | 4290 | 100 | Plus |
CG18672-RC | 1042 | CG18672-RC | 161..1024 | 17..874 | 4195 | 99.3 | Plus |
CG18672-RD | 1027 | CG18672-RD | 161..1009 | 17..874 | 4120 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:45:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31261302..31261649 | 527..874 | 1740 | 100 | Plus |
3R | 32079331 | 3R | 31260982..31261238 | 270..526 | 1285 | 100 | Plus |
3R | 32079331 | 3R | 31260669..31260765 | 83..179 | 485 | 100 | Plus |
3R | 32079331 | 3R | 31260829..31260924 | 178..273 | 465 | 99 | Plus |
3R | 32079331 | 3R | 31260407..31260476 | 17..86 | 350 | 100 | Plus |
3R | 32079331 | 3R | 31259200..31259300 | 359..459 | 205 | 80.2 | Plus |
3R | 32079331 | 3R | 10118874..10118949 | 660..735 | 185 | 82.9 | Plus |
3R | 32079331 | 3R | 31259784..31259856 | 647..719 | 185 | 83.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:45:06 has no hits.
BS32759.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:46 Download gff for
BS32759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18672-RB | 161..1013 | 17..869 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:52 Download gff for
BS32759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18672-RB | 161..1013 | 17..869 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:52 Download gff for
BS32759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31260407..31260473 | 17..83 | 100 | -> | Plus |
3R | 31260670..31260764 | 84..178 | 100 | -> | Plus |
3R | 31260830..31260920 | 179..269 | 100 | -> | Plus |
3R | 31260982..31261238 | 270..526 | 100 | -> | Plus |
3R | 31261302..31261644 | 527..869 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:46 Download gff for
BS32759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27086129..27086195 | 17..83 | 100 | -> | Plus |
arm_3R | 27086392..27086486 | 84..178 | 100 | -> | Plus |
arm_3R | 27086552..27086642 | 179..269 | 100 | -> | Plus |
arm_3R | 27086704..27086960 | 270..526 | 100 | -> | Plus |
arm_3R | 27087024..27087366 | 527..869 | 100 | | Plus |
BS32759.pep Sequence
Translation from 16 to 870
> BS32759.pep
MQAIAFHKLLLLLPLAFYQSTNGMEWNYLKNGKDWEDLCSSGKHQSPILL
DSRTARKWVLPGITFWHYYRLLKRPFYIRNNGHSISLDIPVTSNGRKPFI
TGGRLKGRYYADGLHFHWGSYKSRGSEHLINKRRFDAEIHIVHRNEKYRN
IAQAVRQKDGLAVVAIMVAIKDNAKSTPLSRLMEAVVRVPIEDSNATVFG
QSSLDQLIGGVSHRDFFTYEGSLTTPLCDETVTWIVFTETTTVTMSSVSK
FWLLRDHWGHRLINNYRIVQDLNNRTVFYKKRMS*
BS32759.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18672-PB | 284 | CG18672-PB | 1..284 | 1..284 | 1514 | 100 | Plus |
CG18672-PC | 286 | CG18672-PC | 1..286 | 1..284 | 1501 | 99.3 | Plus |
CG18672-PD | 281 | CG18672-PD | 1..281 | 1..284 | 1488 | 98.9 | Plus |
CG3669-PB | 298 | CG3669-PB | 1..286 | 1..280 | 761 | 52.4 | Plus |
CG18673-PC | 302 | CG18673-PC | 42..299 | 25..280 | 557 | 41.9 | Plus |