BS32760.complete Sequence
845 bp assembled on 2014-01-22
GenBank Submission: KX804023
> BS32760.complete
GAAGTTATCAGTCGACATGCCCATGAATGGACAGGCGGGTGGACAAAATG
GACGCAAGCGTCGGGACAACGAAGATTTCTCGGTGAAGTTATCCACCATC
AGGATCTGGATTCACGAGAAGGACATTGGCAAGTTGACGCGTATTTTATG
GGGTGGCCAGGGCAACAGACTATGCCAACAGGCCAGCAACAATGGTCGAG
TGAAGCGCTTCCTCGCAGCCGTTCCCCATGTCATGAATGCCATCAAAGAT
CTGCACCAGGCGGTCATCGACAACAATCTGGAGACCGTGCAGGCGCAGCT
GGAGCCACCGGTGCCCAGTGCACTGGTCACCTGCAAGGACGGCAATGGCT
TGAACATCATACACAAGGCCGCCGGACTGGGCCACACCAAGCTGCTGGAA
TACCTGGTGGGCATTTGGCCCGAGGGCGCCCATGAGACGGACATTACCGG
AAAGACGCCGCTCCACTGGGCCGCCAGTGCCAAGAACAACATGCGATGCT
ACACACTGCTCACCCAAGCGGGTTGCGACGAGGAGGCCGTCGATTATAAA
ATGAAGACCCCCTCATACTATCGCCACAAGCCGCACGAAATCGAGCGCGC
CTTCCTGGTTTATGTGCCGGATGCACCTCGCGTCTCCCCCGACAGCGCCA
CCGATTGGGACGCCTTGTGCGATGAGAGTGGAGTGGACAACGGAGCGGGG
GGCGATGCCAGCTCCAAGAAACTGGACATCAAGGTGCCGCCTTCTGTGAA
TGGCCGAAAATCGCTGGACGACAGCCTTGAGAACACCTCGGAGCTAGACA
CCAACGACGGAATATTGGAAGAGCTGTAAAAGCTTTCTAGACCAT
BS32760.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:45:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30271-RF | 813 | CG30271-PF | 1..813 | 17..829 | 4065 | 100 | Plus |
| CG30271-RI | 1506 | CG30271-PI | 64..857 | 17..810 | 3970 | 100 | Plus |
| CG30271-RH | 1464 | CG30271-PH | 22..815 | 17..810 | 3970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:45:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30271-RF | 1600 | CG30271-RF | 199..1011 | 17..829 | 4065 | 100 | Plus |
| CG30271-RI | 2185 | CG30271-RI | 281..1074 | 17..810 | 3970 | 100 | Plus |
| CG30271-RH | 1656 | CG30271-RH | 107..900 | 17..810 | 3970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:45:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22819641..22819953 | 235..547 | 1565 | 100 | Plus |
| 2R | 25286936 | 2R | 22820159..22820329 | 548..718 | 855 | 100 | Plus |
| 2R | 25286936 | 2R | 22819421..22819583 | 73..235 | 815 | 100 | Plus |
| 2R | 25286936 | 2R | 22820385..22820478 | 717..810 | 470 | 100 | Plus |
| 2R | 25286936 | 2R | 22818910..22818967 | 17..74 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:45:09 has no hits.
BS32760.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:51:48 Download gff for
BS32760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30271-RF | 199..1009 | 17..827 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:21:54 Download gff for
BS32760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30271-RF | 199..1009 | 17..827 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:21:54 Download gff for
BS32760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22820159..22820329 | 548..718 | 100 | -> | Plus |
| 2R | 22820387..22820478 | 719..810 | 100 | -> | Plus |
| 2R | 22821149..22821165 | 811..827 | 100 | | Plus |
| 2R | 22819423..22819583 | 75..235 | 100 | -> | Plus |
| 2R | 22819642..22819953 | 236..547 | 100 | -> | Plus |
| 2R | 22818910..22818967 | 17..74 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:51:48 Download gff for
BS32760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18707664..18707834 | 548..718 | 100 | -> | Plus |
| arm_2R | 18707892..18707983 | 719..810 | 100 | -> | Plus |
| arm_2R | 18708654..18708670 | 811..827 | 100 | | Plus |
| arm_2R | 18706928..18707088 | 75..235 | 100 | -> | Plus |
| arm_2R | 18707147..18707458 | 236..547 | 100 | -> | Plus |
| arm_2R | 18706415..18706472 | 17..74 | 100 | -> | Plus |
BS32760.pep Sequence
Translation from 16 to 828
> BS32760.pep
MPMNGQAGGQNGRKRRDNEDFSVKLSTIRIWIHEKDIGKLTRILWGGQGN
RLCQQASNNGRVKRFLAAVPHVMNAIKDLHQAVIDNNLETVQAQLEPPVP
SALVTCKDGNGLNIIHKAAGLGHTKLLEYLVGIWPEGAHETDITGKTPLH
WAASAKNNMRCYTLLTQAGCDEEAVDYKMKTPSYYRHKPHEIERAFLVYV
PDAPRVSPDSATDWDALCDESGVDNGAGGDASSKKLDIKVPPSVNGRKSL
DDSLENTSELDTNDGILEEL*
BS32760.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30271-PF | 270 | CG30271-PF | 1..270 | 1..270 | 1439 | 100 | Plus |
| CG30271-PH | 487 | CG30271-PH | 8..272 | 1..265 | 1417 | 100 | Plus |
| CG30271-PI | 501 | CG30271-PI | 22..286 | 1..265 | 1417 | 100 | Plus |
| CG30271-PG | 501 | CG30271-PG | 22..286 | 1..265 | 1417 | 100 | Plus |
| CG42284-PD | 657 | CG42284-PD | 67..243 | 19..188 | 200 | 29.9 | Plus |
