Clone BS32762 Report

Search the DGRC for BS32762

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:327
Well:62
Vector:pDNR-Dual
Associated Gene/TranscriptCG43448-RA
Protein status:BS32762.pep: gold
Sequenced Size:317

Clone Sequence Records

BS32762.complete Sequence

317 bp assembled on 2014-01-22

GenBank Submission: KX801254

> BS32762.complete
GAAGTTATCAGTCGACATGAAAAGCTATCTGCTGCTGGGCATATTATTAC
TATATTATCTGTGCATTGATGGACGGAGTGCTGAGATCAAAGAGGAAAGC
GACAATCCGAGCACAAATATACTTAGCACAACGCTTTCGAAAATTTCTCT
GCAGAACATAACCCGTCTCAATAGATCAAGTTTGGGTGGACGCGTACAAA
CTGATCACTTGGGAAGAAATCGGATTTACCATCGGAGAAGAGTTCAAACT
AGACGTCGAAGAACGAACAAAAATAAGCCCAAACATAAACATTCTCTATA
GAAGCTTTCTAGACCAT

BS32762.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:45:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG43448-RA 285 CG43448-PA 1..285 17..301 1425 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:45:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG43448-RA 529 CG43448-RA 5..299 7..301 1445 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:45:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30237324..30237472 301..153 745 100 Minus
3R 32079331 3R 30237642..30237730 95..7 415 97.8 Minus
3R 32079331 3R 30237528..30237589 154..93 310 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:45:36 has no hits.

BS32762.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:52:02 Download gff for BS32762.complete
Subject Subject Range Query Range Percent Splice Strand
CG43448-RA 15..299 17..301 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:22:10 Download gff for BS32762.complete
Subject Subject Range Query Range Percent Splice Strand
CG43448-RA 15..299 17..301 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:22:10 Download gff for BS32762.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30237324..30237470 155..301 100 <- Minus
3R 30237528..30237587 95..154 100 <- Minus
3R 30237643..30237720 17..94 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:52:02 Download gff for BS32762.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26063046..26063192 155..301 100 <- Minus
arm_3R 26063250..26063309 95..154 100 <- Minus
arm_3R 26063365..26063442 17..94 100   Minus

BS32762.pep Sequence

Translation from 16 to 300

> BS32762.pep
MKSYLLLGILLLYYLCIDGRSAEIKEESDNPSTNILSTTLSKISLQNITR
LNRSSLGGRVQTDHLGRNRIYHRRRVQTRRRRTNKNKPKHKHSL*

BS32762.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG43448-PA 94 CG43448-PA 1..94 1..94 479 100 Plus