BS32766.complete Sequence
446 bp assembled on 2014-01-22
GenBank Submission: KX802031
> BS32766.complete
GAAGTTATCAGTCGACATGCTCAAGCTGGTGGATCGAAATGCCGGCGAAA
GGGCACAGTTGACCAGCGATGTGGCCACTTTGAGTGTGCGACTCGCCCAG
GCAAACTTCAACATCGCCAAGCTGCAGAGGGAAATCGAACGCTACAAGGC
CGACATTAGCCTGGCCATCCAATTGCTGCAGTGCAAGCCGGATAGTTTTG
TGTCCCAGAAAGTGTCATCGCTACCCATTGATATTCAGTCGAAGGTGTCG
GCGTACATGAGACTGGAGACGAACTCCCACTCCGATTCCGAGTGCAGCAA
TAGTGGAGTTGGCGTGGCCACCACAGCTTCCTACAAAGTGCTTCCGGCCT
CCGATTCGCCGCCCCCATCCGCCTGCCCCTTCCCGCCCACGGCCATGGTG
TATTCGATGAGGGGAATCGGTAGGTGTTAGAAGCTTTCTAGACCAT
BS32766.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:45:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42324-RH | 414 | CG42324-PH | 1..414 | 17..430 | 2070 | 100 | Plus |
| CG42324-RF | 750 | CG42324-PF | 337..750 | 17..430 | 2070 | 100 | Plus |
| CG42324-RK | 3114 | CG42324-PK | 337..745 | 17..425 | 2045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:45:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42324-RH | 982 | CG42324-RH | 350..763 | 17..430 | 2070 | 100 | Plus |
| CG42324-RF | 1209 | CG42324-RF | 577..990 | 17..430 | 2070 | 100 | Plus |
| CG42324-RK | 5716 | CG42324-RK | 577..985 | 17..425 | 2045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:45:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3504887..3505097 | 220..430 | 1055 | 100 | Plus |
| 3L | 28110227 | 3L | 3486159..3486279 | 17..137 | 605 | 100 | Plus |
| 3L | 28110227 | 3L | 3504720..3504803 | 137..220 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:45:43 has no hits.
BS32766.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:52:04 Download gff for
BS32766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42324-RF | 577..990 | 17..430 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:22:13 Download gff for
BS32766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42324-RF | 577..990 | 17..430 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:22:13 Download gff for
BS32766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3504888..3505097 | 221..430 | 100 | | Plus |
| 3L | 3486159..3486278 | 17..136 | 100 | -> | Plus |
| 3L | 3504720..3504803 | 137..220 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:52:04 Download gff for
BS32766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3486159..3486278 | 17..136 | 100 | -> | Plus |
| arm_3L | 3504720..3504803 | 137..220 | 100 | -> | Plus |
| arm_3L | 3504888..3505097 | 221..430 | 100 | | Plus |
BS32766.pep Sequence
Translation from 16 to 429
> BS32766.pep
MLKLVDRNAGERAQLTSDVATLSVRLAQANFNIAKLQREIERYKADISLA
IQLLQCKPDSFVSQKVSSLPIDIQSKVSAYMRLETNSHSDSECSNSGVGV
ATTASYKVLPASDSPPPSACPFPPTAMVYSMRGIGRC*
BS32766.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42324-PH | 137 | CG42324-PH | 1..137 | 1..137 | 688 | 100 | Plus |
| CG42324-PF | 249 | CG42324-PF | 113..249 | 1..137 | 688 | 100 | Plus |
| CG42324-PG | 925 | CG42324-PG | 1..136 | 1..136 | 679 | 100 | Plus |
| CG42324-PK | 1037 | CG42324-PK | 113..248 | 1..136 | 679 | 100 | Plus |
| CG42324-PI | 923 | CG42324-PI | 1..134 | 1..134 | 668 | 100 | Plus |
