BS32773.complete Sequence
698 bp assembled on 2014-01-22
GenBank Submission: KX800305
> BS32773.complete
GAAGTTATCAGTCGACATGGAGGAGACATATCTGTACGATCCTAATCTGC
TGCTAAAGCTGGACTTTCATCGCAGTCCCGCCAACTTTAAGCCCTTCATA
TCGGCGGCCAATCCCGGCGAGCCCTGGATGAAAGTGCGTCCTCTCAAGGA
CACCGACTACGATCGTGGATTCCTGCAGCTGCTCTCGCAACTCACCCATG
TCGGCAATGTGAATCGTACGCAGTTCTTGACCCGCTTTTCGCAGATGAAA
GCCAGTGGGGACTACTTTGTCACCGTCATTGAGGACACTCGCAAGAATGA
GATTATTGGAGCTGCATCCTTGGTGATCGAGCGCAAGTTCATCCATAACT
GTGCTGTGCGTGGCCGTCTAGAGGATGTGGTGGTCAATGACACGTATCGC
GGGAAGCAACTGGGAAAACTGATCGTGGTCACCGTATCGCTGCTGGCCGA
GGAACTGGGCTGCTACAAAATGTCGCTGGACTGCAAGGACAAGCTGATCA
AGTTCTATGAGTCGCTGGGCTATGTGGCCATTCCCGGAAACTCCAACTCC
ATGACGATTCGCTACGATGAGGGGCCAACGCTCAAGCGGAATGCTACCTC
AGCCGGCTCCAGTGGAACAGTGGGCGACTCCTGCCAAACTGTGGTTGTAA
TATTACCTTTTAAGAGCACCTTCATCAAGTAGAAGCTTTCTAGACCAT
BS32773.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:45:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1969-RE | 666 | CG1969-PE | 1..666 | 17..682 | 3330 | 100 | Plus |
| CG1969-RF | 687 | CG1969-PF | 1..627 | 17..643 | 3135 | 100 | Plus |
| CG1969-RH | 648 | CG1969-PH | 1..627 | 17..643 | 3135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:45:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1969-RE | 895 | CG1969-RE | 134..800 | 16..682 | 3335 | 100 | Plus |
| CG1969-RF | 1341 | CG1969-RF | 134..761 | 16..643 | 3140 | 100 | Plus |
| CG1969-RG | 1495 | CG1969-RG | 288..915 | 16..643 | 3140 | 100 | Plus |
| CG1969-RF | 1341 | CG1969-RF | 1157..1198 | 641..682 | 210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:45:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29741150..29741372 | 421..643 | 1115 | 100 | Plus |
| 3R | 32079331 | 3R | 29740567..29740778 | 19..230 | 1060 | 100 | Plus |
| 3R | 32079331 | 3R | 29740840..29740967 | 231..358 | 640 | 100 | Plus |
| 3R | 32079331 | 3R | 29741028..29741091 | 358..421 | 320 | 100 | Plus |
| 3R | 32079331 | 3R | 29741768..29741809 | 641..682 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:45:55 has no hits.
BS32773.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:52:09 Download gff for
BS32773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1969-RE | 135..800 | 17..682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:22:19 Download gff for
BS32773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1969-RE | 135..800 | 17..682 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:22:19 Download gff for
BS32773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29741029..29741090 | 359..420 | 100 | -> | Plus |
| 3R | 29741150..29741369 | 421..640 | 100 | -> | Plus |
| 3R | 29741768..29741809 | 641..682 | 100 | | Plus |
| 3R | 29740566..29740778 | 17..230 | 99 | -> | Plus |
| 3R | 29740840..29740967 | 231..358 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:52:09 Download gff for
BS32773.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25566288..25566500 | 17..230 | 99 | -> | Plus |
| arm_3R | 25566562..25566689 | 231..358 | 100 | -> | Plus |
| arm_3R | 25566751..25566812 | 359..420 | 100 | -> | Plus |
| arm_3R | 25566872..25567091 | 421..640 | 100 | -> | Plus |
| arm_3R | 25567490..25567531 | 641..682 | 100 | | Plus |
BS32773.pep Sequence
Translation from 16 to 681
> BS32773.pep
MEETYLYDPNLLLKLDFHRSPANFKPFISAANPGEPWMKVRPLKDTDYDR
GFLQLLSQLTHVGNVNRTQFLTRFSQMKASGDYFVTVIEDTRKNEIIGAA
SLVIERKFIHNCAVRGRLEDVVVNDTYRGKQLGKLIVVTVSLLAEELGCY
KMSLDCKDKLIKFYESLGYVAIPGNSNSMTIRYDEGPTLKRNATSAGSSG
TVGDSCQTVVVILPFKSTFIK*
BS32773.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1969-PE | 221 | CG1969-PE | 1..221 | 1..221 | 1142 | 100 | Plus |
| CG1969-PH | 215 | CG1969-PH | 1..209 | 1..209 | 1084 | 100 | Plus |
| CG1969-PG | 215 | CG1969-PG | 1..209 | 1..209 | 1084 | 100 | Plus |
| CG1969-PB | 215 | CG1969-PB | 1..209 | 1..209 | 1084 | 100 | Plus |
| CG1969-PF | 228 | CG1969-PF | 1..209 | 1..209 | 1084 | 100 | Plus |
