BS32774.complete Sequence
416 bp assembled on 2014-01-22
GenBank Submission: KX800788
> BS32774.complete
GAAGTTATCAGTCGACATGTTCGCGTTACGTGCTGCATCTAAAGCCGATA
AGAATTTGCTGCCATTCTTGGGGCAATTGTCTCGTAGCCATGCTGCCAAG
GCTGCAAAGGCTGCAGCTGCCGCAAATGGAAAGATTGTGGCCGTAATTGG
TGCAGTCGTCGATGTCCAGTTTGATGATAACTTACCGCCCATTCTGAATG
CCTTGGAAGTAGACAACCGTTCTCCTCGGCTCGTGCTAGAGGTGGCCCAG
CACTTGGGAGAAAATACCGTGCGCACTATCGCCATGGATGGTACCGAAGG
CTTGGTTCGCGGACAGAAGGTTCTCGATACTGGGTATCCTATCCGAATTC
CAGTTGGTGCCGAAACACTAGGACGCATCATTAATGTTATTGGTAAGTAA
AAGCTTTCTAGACCAT
BS32774.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:46:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ATPsyn-beta-RD | 1518 | CG11154-PD | 1..378 | 17..394 | 1890 | 100 | Plus |
| ATPsyn-beta-RA | 1518 | CG11154-PA | 1..378 | 17..394 | 1890 | 100 | Plus |
| ATPsyn-beta-RC | 1536 | CG11154-PC | 1..396 | 17..394 | 1675 | 95.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:46:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ATPsyn-beta-RD | 2048 | CG11154-RD | 27..404 | 17..394 | 1890 | 100 | Plus |
| ATPsyn-beta-RA | 1688 | CG11154-RA | 27..404 | 17..394 | 1890 | 100 | Plus |
| ATPsyn-beta-RC | 2026 | CG11154-RC | 347..742 | 17..394 | 1675 | 95.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:45:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 1032907..1033227 | 81..401 | 1605 | 100 | Plus |
| 4 | 1348131 | 4 | 1031890..1031953 | 17..80 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:45:59 has no hits.
BS32774.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:52:12 Download gff for
BS32774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-beta-RB | 32..408 | 22..398 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:22:21 Download gff for
BS32774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-beta-RA | 32..405 | 22..398 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:22:21 Download gff for
BS32774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 1031895..1031953 | 22..80 | 100 | -> | Plus |
| 4 | 1032907..1033224 | 81..398 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:52:12 Download gff for
BS32774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 1052521..1052579 | 22..80 | 100 | -> | Plus |
| arm_4 | 1053533..1053850 | 81..398 | 100 | | Plus |
BS32774.pep Sequence
Translation from 16 to 399
> BS32774.pep
MFALRAASKADKNLLPFLGQLSRSHAAKAAKAAAAANGKIVAVIGAVVDV
QFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQ
KVLDTGYPIRIPVGAETLGRIINVIGK*
BS32774.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ATPsyn-beta-PD | 505 | CG11154-PD | 1..127 | 1..127 | 620 | 99.2 | Plus |
| ATPsyn-beta-PA | 505 | CG11154-PA | 1..127 | 1..127 | 620 | 99.2 | Plus |
| ATPsyn-beta-PC | 511 | CG11154-PC | 1..133 | 1..127 | 603 | 94.7 | Plus |
| ms(3)72Dt-PA | 622 | CG5389-PA | 104..193 | 38..126 | 267 | 62.2 | Plus |
