BS32785.complete Sequence
3140 bp assembled on 2014-03-03
GenBank Submission: KX802245
> BS32785.complete
GAAGTTATCAGTCGACATGGCCAGTTTTAATTCCCAACTGAAAATGGAGA
CGGGCCTGCACGAGCGTGATCGTGCTGGAGTCCAGGACTTTGTGCTCCTC
GAGAACTACCAGAGCGAAGAAGCCTTCATCGGGAATCTGAAGAAGCGGTT
CCAGGAGGACCTGATCTATACCTACATTGGCCAGGTGTTGATCTCCGTGA
ATCCCTACAAGCAGCTGCCCATCTACACCGATGACCATGTCAAGGCGTAC
AGAAACAAGCACTTCTACGAGATGCCCCCACACATCTTTGCGGTGACTGA
CAACGCCTTCCGTTCGCTGATCGAGGAGAACCGCGGCCAGTGCGTGCTCA
TCTCCGGAGAGAGTGGTTCCGGCAAGACAGAGGCCTCCAAGAAGGTGCTG
CAGTTCATAGCCGCCTGCTCCGGCAACCAGACGACCGTCGAGGGCGTCAA
GGACAAGCTGCTAAAGAGCAATCCCGTGCTGGAGGCCTTCGGCAATGCCA
AGACAAACCGCAATGACAACTCCTCGCGGTTCGGCAAGTACATGGACATC
CAGTTCGATTTCAAAGGAGCTCCGATCGGAGGCAACATCCTAAACTATCT
GCTGGAAAAGTCGCGAGTGGTGGCTCAAATGGGAGGCGAGCGCAACTTCC
ACATCTTCTACCAACTCTTGGCCGGCGCCGACGAGGCCCTTCTGCAGGAA
CTGCGCCTGGAGCGGGCTCTGGACACTTATAGCTACCTGACAGATGGGCT
CAATGGCACCGTGACGAGAATTAACGATGCGGACAGCTTCAAGCAGGTCC
AGCAGGCTCTCACTGTGATCGATTTCACCAAGGAGGAGCAGCGCGAGATC
TTCGGAATCGTGGCCAGCATTCTGCATCTAGGAAACGTTGGCTTCACTGA
GGTGGAGGGCAATGCCAAGGTGAACAGCAGGGATCTGGTAGTCACCGCTG
CTCGTTTGCTGGGTGTAAACGCAAGCGAACTGGAAGCCGCCCTAACGCAC
CGCACAATTGACGCTCGGGGAGATGTGGTGACCTCACCACTGAACCAGGA
GCTCGCCATCTATGCCAGGGACGCCTTGGCCAAGGCTGTCTATGATCGTC
TGTTCTCCTGGCTGGTTCAGCGCCTCAACATCTCGCTGCAGGCGAAGGAA
ACGCGGGCATCCAGAAATAATGTGATGGGCATTCTGGACATCTATGGCTT
CGAGATCTTCCAGAAGAACAGCTTTGAGCAGTTCTGCATCAATTTCTGCA
ACGAGAAGCTGCAGCAGCTGTTCATCGAGCTTACCCTTAAGTCGGAGCAG
GATGAATACCGCCGGGAGGGCATCGAGTGGATACCTGTGGAGTACTTCGA
CAACAAGGTGATTTGCAATCTGATCGAGGAGAAGCACAAGGGCATCATCT
CCATACTGGACGAGGAGTGCTTGCGACCAGGAGAGCCCACGGATAAGACC
TTCCTTGAGAAGCTCACCCAGAAATTGGCCCAGCACCACCACTACGTTTG
CCACGAAAAGGCGCCCGCCCACATCAAGAAAATCATGCTGCGCGATGAGT
TCCGCTTGGTGCACTATGCCGGCGAGGTCACCTACAGTGTCAATGGATTC
CTGGACAAGAACAACGACCTGTTGTTCAGGGATCTAAAGGAGACCCTCAG
CAAGGCTGGCAACGGCATTGTGAGGAACTGCTTCCCGGAGAAGGAGCTGC
GCAGCCTGAAGCGTCCGGAGACGGCTATCACCCAGTTCCGGGCATCTCTT
AACAACCTCATGGACATTCTGATGTGCAAGGAGCCGAGCTACATTCGCTG
CATCAAGCCAAACGACCTGCAGACTGCCAACGTCTTCAACGATGAGTTGG
TACTGCACCAGGTCAAGTACCTTGGCCTGATGGAGAATCTGCGTGTGAGG
CGAGCTGGTTTCGCCTACCGACGAACGTATGAGCTCTTCCTGGAGCGCTA
CAAGTCCCTGAGCAAGTCCACCTGGCCCAATTACAAGGGTCCCGGTGGCC
CGAAAGCGGGTGTCCAGCAGCTGGTGAAAGATTTGGGCTGGGACGAGGAA
AAGTACAGGGTGGGCGAGACGAAACTATTCATCCGCTGGCCGAGAACCTT
GTTCGATACGGAGGATGCCTACCAGGAGAAGAAACATGAGATAGCGGCCA
TCATCCAGGCCCACTGGAAGGGATTGATGCAAAGGAGGAAGTATCTGAAA
CTGCGTGCTCAGGTGATCATAATGCAGAGCTATTGTCGCCGAAAGTTGGC
ACAGCAGGCGGCCAAGAAGCGCAGGGAGGCCGCCGATAAGATTCGTGCCT
TTATCAAGGGCTTCATCACCCGGAACGATGCCCCGAATGGCTTCAATGAA
GAGTTTATTGCCAACGCCAAGCGTATGTGGCTGCTTCGACTGGCGAAGGA
GCTGCCCACCAAGGTACTGGATAAGAGCTGGCCCCATGCCCCTGGGCACT
GCGAGGAGGCCTCCGGCATCCTTCACCGCCTGCACCGTCTCCACTTGGCC
AGGATCTACCGCCTTAAACTGACGCCGCAGCAGAAGAGGCAATTCGAGCT
GAAGGTCCTGGCGGAGAAGGTCTTTAAGGGCAAGAAGAACAACTACGCGA
GCAGTGTGTCCACTTGGTTCCAGGAGGACCGCATCCCCAAGGAGCACATC
CAGCGAGTCAACGACTTCGTGGCCAGCACCTTCGGCAGCGAGCAGCTTAA
GTACCAGTCCTTCTGCACCAAGTTCGATCGGCACGGCTACAAGTCCCGCG
ACCGCTTTATCCTGCTGAGCAACAAGGCTATATATGTCCTCGACGGCAAG
ACCTACAAGCAGAAGCACCGCCTGCCGCTAGACAAGATCGACTTCACGCT
GACGAACCACAACGACGACCTGATGGTCATCCGCATACCGCTCGACCTGA
AAAAGGACAAGGGCGACTTGATTCTGATCATTCCGCGCATAATCGAGTTC
AGCACGTATATCATTGACACCGTGGGAACTGCCTCCATCGTCTCCATTGT
GGACAGAAATTCGTTGGAGCACAACGTAGTCAAGGGCAAGGGCGGCGTCA
TCGACATCCAAACCGGCGCCGAGCCCGGAGTGGTTCGTGATAAGGGCCAT
CTAGTTATCATTGGAACGCAATAAAAGCTTTCTAGACCAT
BS32785.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:03:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Myo61F-RA | 3108 | CG9155-PA | 1..3108 | 17..3124 | 15540 | 100 | Plus |
| Myo61F-RD | 3159 | CG9155-PD | 60..3159 | 25..3124 | 15500 | 100 | Plus |
| Myo61F-RB | 3081 | CG9155-PB | 1..3081 | 44..3124 | 15405 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:03:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Myo61F-RA | 3446 | CG9155-RA | 135..3244 | 15..3124 | 15550 | 100 | Plus |
| Myo61F-RC | 3592 | CG9155-RC | 288..3390 | 22..3124 | 15515 | 100 | Plus |
| Myo61F-RD | 3369 | CG9155-RD | 68..3167 | 25..3124 | 15500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:03:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1326897..1329163 | 748..3014 | 11335 | 100 | Plus |
| 3L | 28110227 | 3L | 1326373..1326835 | 286..748 | 2315 | 100 | Plus |
| 3L | 28110227 | 3L | 1325993..1326139 | 23..169 | 735 | 100 | Plus |
| 3L | 28110227 | 3L | 1326201..1326316 | 170..285 | 580 | 100 | Plus |
| 3L | 28110227 | 3L | 1329224..1329320 | 3013..3109 | 485 | 100 | Plus |
| 2L | 23513712 | 2L | 10496671..10496828 | 622..465 | 280 | 78.5 | Minus |
| 2L | 23513712 | 2L | 10494430..10494521 | 1275..1184 | 235 | 83.7 | Minus |
| 3R | 32079331 | 3R | 24257835..24257909 | 543..469 | 225 | 86.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 15:03:12 has no hits.
BS32785.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:25:29 Download gff for
BS32785.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myo61F-RA | 137..3242 | 17..3122 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:30:16 Download gff for
BS32785.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myo61F-RA | 137..3242 | 17..3122 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:30:16 Download gff for
BS32785.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1325993..1326139 | 23..169 | 100 | -> | Plus |
| 3L | 1326201..1326316 | 170..285 | 100 | -> | Plus |
| 3L | 1326373..1326835 | 286..748 | 100 | -> | Plus |
| 3L | 1326898..1329161 | 749..3012 | 100 | -> | Plus |
| 3L | 1329224..1329320 | 3013..3109 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:25:29 Download gff for
BS32785.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1325993..1326139 | 23..169 | 100 | -> | Plus |
| arm_3L | 1326201..1326316 | 170..285 | 100 | -> | Plus |
| arm_3L | 1326373..1326835 | 286..748 | 100 | -> | Plus |
| arm_3L | 1326898..1329161 | 749..3012 | 100 | -> | Plus |
| arm_3L | 1329224..1329320 | 3013..3109 | 100 | -> | Plus |
BS32785.pep Sequence
Translation from 16 to 3123
> BS32785.pep
MASFNSQLKMETGLHERDRAGVQDFVLLENYQSEEAFIGNLKKRFQEDLI
YTYIGQVLISVNPYKQLPIYTDDHVKAYRNKHFYEMPPHIFAVTDNAFRS
LIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEGVKDKLLK
SNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSR
VVAQMGGERNFHIFYQLLAGADEALLQELRLERALDTYSYLTDGLNGTVT
RINDADSFKQVQQALTVIDFTKEEQREIFGIVASILHLGNVGFTEVEGNA
KVNSRDLVVTAARLLGVNASELEAALTHRTIDARGDVVTSPLNQELAIYA
RDALAKAVYDRLFSWLVQRLNISLQAKETRASRNNVMGILDIYGFEIFQK
NSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVIC
NLIEEKHKGIISILDEECLRPGEPTDKTFLEKLTQKLAQHHHYVCHEKAP
AHIKKIMLRDEFRLVHYAGEVTYSVNGFLDKNNDLLFRDLKETLSKAGNG
IVRNCFPEKELRSLKRPETAITQFRASLNNLMDILMCKEPSYIRCIKPND
LQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSK
STWPNYKGPGGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTED
AYQEKKHEIAAIIQAHWKGLMQRRKYLKLRAQVIIMQSYCRRKLAQQAAK
KRREAADKIRAFIKGFITRNDAPNGFNEEFIANAKRMWLLRLAKELPTKV
LDKSWPHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQKRQFELKVLAE
KVFKGKKNNYASSVSTWFQEDRIPKEHIQRVNDFVASTFGSEQLKYQSFC
TKFDRHGYKSRDRFILLSNKAIYVLDGKTYKQKHRLPLDKIDFTLTNHND
DLMVIRIPLDLKKDKGDLILIIPRIIEFSTYIIDTVGTASIVSIVDRNSL
EHNVVKGKGGVIDIQTGAEPGVVRDKGHLVIIGTQ*
BS32785.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:02:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Myo61F-PA | 1035 | CG9155-PA | 1..1035 | 1..1035 | 5362 | 100 | Plus |
| Myo61F-PD | 1052 | CG9155-PD | 21..1052 | 4..1035 | 5349 | 100 | Plus |
| Myo61F-PB | 1026 | CG9155-PB | 1..1026 | 10..1035 | 5319 | 100 | Plus |
| Myo61F-PC | 1026 | CG9155-PC | 1..1026 | 10..1035 | 5319 | 100 | Plus |
| Myo31DF-PC | 1011 | CG7438-PC | 7..893 | 20..933 | 1853 | 42.2 | Plus |
