BS32793.complete Sequence
734 bp assembled on 2014-01-22
GenBank Submission: KX800215
> BS32793.complete
GAAGTTATCAGTCGACATGCGAAATAAATTTCAATCCGCTATTAGGGGCG
TAACGCGACAATACATTATAAGATCGTGGCCCCGAGGCAGAGAGCTATTG
AGGACGCAACTGATTATCCCGCCATCTTCTACATCTAGCCCATTTACCTG
TAGAAACTACTCAAAGTTTAGCACACATTTGTCTATGGAGCGGGCGTTGG
AGTTGCTATGCAACCTTGATGACGAGGAACGCGGCAACCTGCGCTCCGCT
CTTGGCAGGCTAGATGCCGACAAGGAAAAAAAATTATACGAGATTGAGAC
GGCAGCATCCCCCACGGCAGGTCAATTGTACAGCATTTTCTTTGTAAATG
CAGTGCCGTTTATCGCTTTCGGATTCCTTGACAATTTCATAATGATCATG
GCGGGTGAATACATTGAATATTATTTGGGCCACTTTATAACGCTGTCTAC
AATGGCAGCCGCAGGACTAGGAAACACCATAAGCGATATTTTAGGCATCA
CTATGGCCACCTACGTTGAGAATGGGTGCCAGATATTGGGTCTAAAGCAG
CCCAATTTGACTCCAGCGCAATTTGAATTAAAGTCTAGCAAGCGGTCTTC
AAGTTACGGACGGATTGTCGGGATCACTGTAGGCTGTTTGCTTGGAATGT
GTCCTTTATGGTTTATGGATGAAAAAGCAGATAAGGTGAATGTAAAAGAT
GAAATCCCGAAAAATTAGAAGCTTTCTAGACCAT
BS32793.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:46:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17715-RC | 702 | CG17715-PC | 1..702 | 17..718 | 3510 | 100 | Plus |
| CG17715-RF | 702 | CG17715-PF | 1..702 | 17..718 | 3510 | 100 | Plus |
| CG17715-RB | 825 | CG17715-PB | 401..825 | 294..718 | 2125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:46:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17715-RC | 1501 | CG17715-RC | 293..996 | 17..720 | 3520 | 100 | Plus |
| CG17715-RF | 4284 | CG17715-RF | 352..1055 | 17..720 | 3520 | 100 | Plus |
| CG17715-RE | 1804 | CG17715-RE | 873..1299 | 294..720 | 2135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:46:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 808244..808520 | 293..17 | 1385 | 100 | Minus |
| 2L | 23513712 | 2L | 22844571..22844847 | 17..293 | 1385 | 100 | Plus |
| 2R | 25286936 | 2R | 803458..803663 | 608..403 | 1030 | 100 | Minus |
| 2L | 23513712 | 2L | 22849428..22849633 | 403..608 | 1030 | 100 | Plus |
| 2R | 25286936 | 2R | 803286..803402 | 720..604 | 570 | 99.1 | Minus |
| 2L | 23513712 | 2L | 22849689..22849805 | 604..720 | 570 | 99.1 | Plus |
| 2R | 25286936 | 2R | 803717..803785 | 404..336 | 345 | 100 | Minus |
| 2L | 23513712 | 2L | 22849306..22849374 | 336..404 | 345 | 100 | Plus |
| 2R | 25286936 | 2R | 803836..803877 | 335..294 | 210 | 100 | Minus |
| 2L | 23513712 | 2L | 22849214..22849255 | 294..335 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:46:38 has no hits.
BS32793.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:52:27 Download gff for
BS32793.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17715-RF | 352..1053 | 17..718 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:22:40 Download gff for
BS32793.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17715-RF | 352..1053 | 17..718 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:22:40 Download gff for
BS32793.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22844571..22844847 | 17..293 | 100 | -> | Plus |
| 2L | 22849214..22849255 | 294..335 | 100 | -> | Plus |
| 2L | 22849306..22849373 | 336..403 | 100 | -> | Plus |
| 2L | 22849429..22849632 | 404..607 | 100 | -> | Plus |
| 2L | 22849693..22849803 | 608..718 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:52:27 Download gff for
BS32793.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22737303..22737579 | 17..293 | 100 | -> | Plus |
| arm_2L | 22741946..22741987 | 294..335 | 100 | -> | Plus |
| arm_2L | 22742038..22742105 | 336..403 | 100 | -> | Plus |
| arm_2L | 22742161..22742364 | 404..607 | 100 | -> | Plus |
| arm_2L | 22742425..22742535 | 608..718 | 100 | | Plus |
BS32793.pep Sequence
Translation from 16 to 717
> BS32793.pep
MRNKFQSAIRGVTRQYIIRSWPRGRELLRTQLIIPPSSTSSPFTCRNYSK
FSTHLSMERALELLCNLDDEERGNLRSALGRLDADKEKKLYEIETAASPT
AGQLYSIFFVNAVPFIAFGFLDNFIMIMAGEYIEYYLGHFITLSTMAAAG
LGNTISDILGITMATYVENGCQILGLKQPNLTPAQFELKSSKRSSSYGRI
VGITVGCLLGMCPLWFMDEKADKVNVKDEIPKN*
BS32793.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17715-PC | 233 | CG17715-PC | 1..233 | 1..233 | 1203 | 100 | Plus |
| CG17715-PF | 233 | CG17715-PF | 1..233 | 1..233 | 1203 | 100 | Plus |
| CG17715-PB | 274 | CG17715-PB | 1..274 | 1..233 | 1150 | 84.7 | Plus |
| CG17715-PD | 274 | CG17715-PD | 1..274 | 1..233 | 1150 | 84.7 | Plus |
| CG17715-PG | 269 | CG17715-PG | 1..267 | 1..226 | 1101 | 83.1 | Plus |
