Clone BS32803 Report

Search the DGRC for BS32803

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:328
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptDrip-RC
Protein status:BS32803.pep: full length peptide match
Sequenced Size:764

Clone Sequence Records

BS32803.complete Sequence

764 bp assembled on 2014-01-22

GenBank Submission: KX806264

> BS32803.complete
GAAGTTATCAGTCGACATGGTTTTTGAAATGTCGAAATTCGTTGGCGTTG
CCGACATAACCGAGAACAAGAAAATCTGGCGCATGCTGCTCGGCGAACTG
GTGGGCACATTTTTCTTGATCTTCGTCGGCGTTGGCAGCACGACGAGCGG
AAGTGTACCACAAATCGCATTCACCTTTGGCTTGACGGTGGCCACCATCG
CCCAGGGCTTGGGCCACCTCAGTGGCTGTCACATTAATCCGGCGGTCACC
CTTGGATTCCTGATCGTTGGTGAGATCAGCATTCTGAAGGCTGCCTTCTA
CATCATCGTCCAATGCGTGGGCGCCATTGCTGGAGCGGCTGTGATAAAGG
TGGCACTCGATGGAGTGGCTGGTGGCGACCTGGGAGTATCCTCCTTTGAT
CCCTCCCTGAACTGTGCACAGGCGGTGCTGATCGAAGCGCTGATCACCTT
TATTTTGGTTTTCGTGGTCAAGGCTGTTTCGGATCCTGGACGCCAGGATA
TCAAGGGATCAGCGCCACTGGCTGTTGGTTTGGCCATCGCCGCTGGCCAT
TTGTGTGCAATCAAACTGAGCGGTGCCAGCATGAATCCCGCCCGGTCCTT
TGGTCCCGCCGTAGTGCAGGGCGTCTGGACCTATCACTGGGTTTACTGGG
TGGGTCCCATTGCCGGCGGCCTGTTGGCCGGAATCATCTACAGATTAATC
TTCAAGGTACGCAAGGGCGATGATGAGACCGACTCGTACGACTTCTAAAA
GCTTTCTAGACCAT

BS32803.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:46:47
Subject Length Description Subject Range Query Range Score Percent Strand
Drip-RC 732 CG9023-PC 1..732 17..748 3660 100 Plus
Drip-RD 729 CG9023-PD 6..729 25..748 3620 100 Plus
Drip-RB 738 CG9023-PB 16..738 26..748 3615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:46:48
Subject Length Description Subject Range Query Range Score Percent Strand
Drip-RC 1514 CG9023-RC 353..1085 17..749 3665 100 Plus
Drip-RD 1288 CG9023-RD 135..859 25..749 3625 100 Plus
Drip-RE 1180 CG9023-RE 28..751 26..749 3620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:46:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11412632..11412988 559..203 1785 100 Minus
2R 25286936 2R 11412385..11412574 749..560 950 100 Minus
2R 25286936 2R 11421257..11421437 206..26 905 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:46:46 has no hits.

BS32803.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:52:29 Download gff for BS32803.complete
Subject Subject Range Query Range Percent Splice Strand
Drip-RC 353..1082 17..746 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:22:43 Download gff for BS32803.complete
Subject Subject Range Query Range Percent Splice Strand
Drip-RC 353..1082 17..746 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:22:43 Download gff for BS32803.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11412388..11412574 560..746 100 <- Minus
2R 11412632..11412985 206..559 100 <- Minus
2R 11421258..11421442 21..205 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:52:29 Download gff for BS32803.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7299893..7300079 560..746 100 <- Minus
arm_2R 7300137..7300490 206..559 100 <- Minus
arm_2R 7308763..7308947 21..205 98   Minus

BS32803.pep Sequence

Translation from 16 to 747

> BS32803.pep
MVFEMSKFVGVADITENKKIWRMLLGELVGTFFLIFVGVGSTTSGSVPQI
AFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQC
VGAIAGAAVIKVALDGVAGGDLGVSSFDPSLNCAQAVLIEALITFILVFV
VKAVSDPGRQDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVV
QGVWTYHWVYWVGPIAGGLLAGIIYRLIFKVRKGDDETDSYDF*

BS32803.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:42
Subject Length Description Subject Range Query Range Score Percent Strand
Drip-PC 243 CG9023-PC 1..243 1..243 1235 100 Plus
Drip-PD 242 CG9023-PD 3..242 4..243 1220 100 Plus
Drip-PB 245 CG9023-PB 6..245 4..243 1220 100 Plus
Drip-PA 245 CG9023-PA 6..245 4..243 1220 100 Plus
Drip-PE 239 CG9023-PE 1..239 5..243 1215 100 Plus