BS32809.complete Sequence
638 bp assembled on 2014-01-22
GenBank Submission: KX803746
> BS32809.complete
GAAGTTATCAGTCGACATGCCGATACTTGGACAAATGTTTCCTGCAAAGC
TGGGTCCCAATTTGATGACAGCCTCCAAAGTGCTAAAAAGTCCTCTTGGC
CAGGCGTTAGTCTCCTTTTTGGTTGGCTACTTTGTCACCACAAAGTTGTC
GCAATTTTATGGCAAATTCAAGAGGGACTCTGAGAAATCCGATGAGTCGA
CGCAGTACTTGGACATGTACCCCAGGAAAGAGAGTCAGCCAAAGGACACC
AAAGGACACGATATCGTTCTGCTCACTCTGGAGGAGCTAACTGCCTTCGA
TGGCTCGAGTCCCAGTCTACCCATTTACACCGCTCTGAATGGCCTCATAT
ACGATCTGAGTCCGGGCCGAGAAAAGTTCAGCAGTCACGGTCCGTACTCC
CTATTGGCCGGTTGCAATGCCAACAAGGTCCTGAACATTGCCTGCAGTTC
CATGGGCGTCTGCGCTGCGAACGTAATAAGTCGCTGGGAGCAGAGCCTAA
GAGCCGAATTTAAAGTCGTAGGATATTTAGTCGATGCTGATATAGATATT
ATTAGCGGTAGTCCAGTCAAACATACAAATTCGGCCATAGGGGAGCAAAT
GGAGAAGAGTGATATCGTTTAAAAGCTTTCTAGACCAT
BS32809.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:46:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| c-cup-RA | 606 | CG15623-PA | 1..606 | 17..622 | 3030 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:46:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| c-cup-RA | 882 | CG15623-RA | 112..717 | 17..622 | 3030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:46:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1831792..1832366 | 622..48 | 2875 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:46:50 has no hits.
BS32809.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:52:29 Download gff for
BS32809.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| c-cup-RA | 112..715 | 17..620 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:22:45 Download gff for
BS32809.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| c-cup-RA | 112..715 | 17..620 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:22:45 Download gff for
BS32809.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1832424..1832454 | 17..47 | 100 | | Minus |
| 2L | 1831794..1832366 | 48..620 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:52:29 Download gff for
BS32809.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1832424..1832454 | 17..47 | 100 | | Minus |
| arm_2L | 1831794..1832366 | 48..620 | 100 | <- | Minus |
BS32809.pep Sequence
Translation from 16 to 621
> BS32809.pep
MPILGQMFPAKLGPNLMTASKVLKSPLGQALVSFLVGYFVTTKLSQFYGK
FKRDSEKSDESTQYLDMYPRKESQPKDTKGHDIVLLTLEELTAFDGSSPS
LPIYTALNGLIYDLSPGREKFSSHGPYSLLAGCNANKVLNIACSSMGVCA
ANVISRWEQSLRAEFKVVGYLVDADIDIISGSPVKHTNSAIGEQMEKSDI
V*
BS32809.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| c-cup-PA | 201 | CG15623-PA | 1..201 | 1..201 | 1029 | 100 | Plus |
