BS32857.complete Sequence
1508 bp assembled on 2014-01-22
GenBank Submission: KX801897
> BS32857.complete
GAAGTTATCAGTCGACATGGCCAAAATCGTACTCTTCTGCCTGCTGAGCC
TCTTGGCATGCGCTGCAGGTCAACGCATTACGACAATCCACCTGGATGGA
GTGCAGTACTTCATCAGCCGAATGAATCCCTACTCCCCGGAGCTCAACTA
CTTCCTGGCCTACCAGTACTGTCGCTCCCTGGGCCTGCAACTGGCCTCCT
TTGAGACGAAGGAGAAGGCCGAGTCGATGACCACGTATCTGAAGAATGCC
GGTTACGGCAACTACGATTTCTGGACCTCCGGCAATCGCCTGGGCACGGG
CATGTTCCTATGGATGAGCACTGGTCTGCCGTTTAACGCCACTTTTGATT
TCTTCGAAAACTCGGCGGACGCCATCCAGGCCGGTCTGCTCGATCCCGTC
GATCATAATAGCAACACCTCACCCCAGCGCACCGCTCGCGACAGCAGCAG
TGGCGCCGAGAAGGGATGCGTGATCCTGAAGCAGCCCACGCTCAAGTGGA
TGCCCGAGGACTGCTCGGCCGTGAAGGACTTCATTTGTGAGCAGACCCGC
TGCTACTACTACAACTACGGCAGCATCCCCGTCTCGTCGGCGCAGGGACG
TCCCATCACCTCCACCACCCCAAGGACTCCTGCCTCCCTGATGAACCTGC
ATGTGGCCGCCACCACCACACCCTTGCCCCTGCTGATGTCCACCAGTGGA
GCAATGTACACCGCTGCCAAGGCCAAATCTTCGCCAGCCGTTGGCCACCG
ACTGATCGATGATTCCAGCTCCCAGCAGCAACCCTCGTTTATGTCCTTTA
AGCTGAACCATGATCGCTCGCTGCCCGATACGGATTCCACTGACGTGGAT
GTGGAGGATCAGGAAGCGGATTTGGATGGCGAGGAGCACGATGACCATGA
GGCCGAGGGCGAAGAGGAGCATGACGAGCACGACAACTTCGAGGAGCATG
CCCGTGAGCTGAGCAACGACAACGATGGCGATATCAAGGAGCACGTATTC
CCACTGAGCGACAACGAACTCCACCCCGAGGTGCATTCGATCGAAGAGGT
ACAGCAGCAGTTGCAGCAGGAGGATGCGGATGCGGACTCGGCACCAGCTC
CCGCGGCGGCTGAGGATAACGAGAGCTCGCAACACGATGCGGAGGCGGAT
GGAGAGCACGAGCAGGATGGAGCTGAGGGCGAGACTGACTTGGAAAATGA
GACGCCGGTGGATCTTATCAAGGCCAACGAACCATTGGCGATGCCCAGCT
CCACTGAATCCCCAGCCGCCGCCATCGAGGAGCGCATCAAGCAGATCGCC
CAGGACTTCCAGAAAATGGCCAGCTCCCAGGAGCTGCAGCCCAAGGAGGA
GCTGACCCCCCAATCCTCCCTGTCACTCAACGATCTGATACGCACCCTGC
GGCCCAACGAACAGCAGATCATTCCGCAGATCGATTCGGACTACTCCAAT
GCCATGCGTGTCCTCGGCAAGCCAATGGCGGCCAATAACTAGAAGCTTTC
TAGACCAT
BS32857.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:46:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43164-RC | 1476 | CG43164-PC | 1..1476 | 17..1492 | 7380 | 100 | Plus |
| CG43164-RE | 1473 | CG43164-PE | 1..1473 | 17..1492 | 7300 | 99.8 | Plus |
| CG43164-RD | 585 | CG43164-PD | 1..581 | 17..597 | 2905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:46:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43164-RC | 2338 | CG43164-RC | 556..2031 | 17..1492 | 7380 | 100 | Plus |
| CG43164-RE | 2012 | CG43164-RE | 233..1705 | 17..1492 | 7300 | 99.8 | Plus |
| CG43164-RB | 2447 | CG43164-RB | 1245..2140 | 597..1492 | 4480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:46:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17507443..17508338 | 597..1492 | 4480 | 100 | Plus |
| 2R | 25286936 | 2R | 17505634..17506011 | 67..444 | 1890 | 100 | Plus |
| 2R | 25286936 | 2R | 17506154..17506310 | 441..597 | 785 | 100 | Plus |
| 2R | 25286936 | 2R | 17502909..17502962 | 17..70 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:46:57 has no hits.
BS32857.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 12:52:33 Download gff for
BS32857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43164-RC | 556..2031 | 17..1492 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:22:49 Download gff for
BS32857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43164-RC | 556..2031 | 17..1492 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:22:49 Download gff for
BS32857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17502909..17502960 | 17..68 | 100 | -> | Plus |
| 2R | 17505636..17506011 | 69..444 | 100 | -> | Plus |
| 2R | 17506158..17506310 | 445..597 | 100 | -> | Plus |
| 2R | 17507444..17508338 | 598..1492 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 12:52:33 Download gff for
BS32857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13390414..13390465 | 17..68 | 100 | -> | Plus |
| arm_2R | 13393141..13393516 | 69..444 | 100 | -> | Plus |
| arm_2R | 13393663..13393815 | 445..597 | 100 | -> | Plus |
| arm_2R | 13394949..13395843 | 598..1492 | 100 | | Plus |
BS32857.pep Sequence
Translation from 16 to 1491
> BS32857.pep
MAKIVLFCLLSLLACAAGQRITTIHLDGVQYFISRMNPYSPELNYFLAYQ
YCRSLGLQLASFETKEKAESMTTYLKNAGYGNYDFWTSGNRLGTGMFLWM
STGLPFNATFDFFENSADAIQAGLLDPVDHNSNTSPQRTARDSSSGAEKG
CVILKQPTLKWMPEDCSAVKDFICEQTRCYYYNYGSIPVSSAQGRPITST
TPRTPASLMNLHVAATTTPLPLLMSTSGAMYTAAKAKSSPAVGHRLIDDS
SSQQQPSFMSFKLNHDRSLPDTDSTDVDVEDQEADLDGEEHDDHEAEGEE
EHDEHDNFEEHARELSNDNDGDIKEHVFPLSDNELHPEVHSIEEVQQQLQ
QEDADADSAPAPAAAEDNESSQHDAEADGEHEQDGAEGETDLENETPVDL
IKANEPLAMPSSTESPAAAIEERIKQIAQDFQKMASSQELQPKEELTPQS
SLSLNDLIRTLRPNEQQIIPQIDSDYSNAMRVLGKPMAANN*
BS32857.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43164-PC | 491 | CG43164-PC | 1..491 | 1..491 | 2564 | 100 | Plus |
| CG43164-PE | 490 | CG43164-PE | 1..490 | 1..491 | 2548 | 99.8 | Plus |
| CG43164-PD | 194 | CG43164-PD | 1..194 | 1..194 | 1039 | 100 | Plus |
| CG43164-PA | 194 | CG18431-PA | 1..194 | 1..194 | 1039 | 100 | Plus |
| CG43164-PB | 193 | CG18431-PB | 1..193 | 1..194 | 1023 | 99.5 | Plus |
