BS32906.complete Sequence
959 bp assembled on 2014-01-22
GenBank Submission: KX802983
> BS32906.complete
GAAGTTATCAGTCGACATGCATAAACGCCTGCAGTATGAAGAGGTGATGA
TTCCAGCACCTTGGGGTCACATAGCAGGCCGTTGGTATGGCAATCGAGCT
GATAGACCCATTTTGGCAATTCACGGATGGCTGGACAATCTGGGAACCTT
CGATCGGCTGATTCCCCTGCTTCCCGACTACATAGGCGTGCTGTGCATCG
ACCTACCCGGACATGGTAGATCTTCTAGGCTTCCGCCGGGTGTGCCCTAC
AACGTCTACGACTATGTGTTCATCATACCGAGGGTGATGAAGGAGTTCGG
CTGGTCCAAGGTCTCCTTAATGGGTCATTCCCTTGGAGGAGTGATGAGCT
TCATGTACGCAGCCATGGCACCAAGCACAGTCGATATGATTATATCATTG
GATGTACTGCTGCCGCGGAGAATCGAGGATCCCAGCAAGTTGACCAAGGA
CATAGAAGGTTATTTGCTGGAGGAGAGGCGACAGGCGGATGGCACCGAAC
ATGAGCCGCCATCGTTCACCTTAAGTAAACTGCGTGAGACGCTCGCCCGG
AACAGCAACAACTCGGTGCCGCAACACCTGGCCGATCACATGCTCCACCG
CCAGGTGGCCAAATCAAACATGTACCCGGAAAAGGTATTCTTCTCCAGAG
ATGGGCGTGTAAAGTTCTATCACATATTCGACATTGAAAACGGACTTGCT
CTTGAAATGGCGAGGCGCATTGAGAAGAAACCCTATCTGGTAATTAAGGG
ATCCCTTTCGCCATTTGTGGGACCTCGATGCAACGAAACAATGTCCATTC
TGTCCCATGATAACCCCAACTTTGAGTTCTACGAAGTGGAGGGCGGCAAG
CATCATGTCCACCTGCATGCCGCCGAGGAGTGTGCCCGCTATATCGTTCC
CTTCATCCGAAATCACAGACCTCCAAGAAGCAGCAAACTTTAAAAGCTTT
CTAGACCAT
BS32906.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:47:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15820-RA | 927 | CG15820-PA | 1..927 | 17..943 | 4470 | 98.8 | Plus |
| CG15879-RA | 1029 | CG15879-PA | 37..395 | 56..414 | 730 | 80.2 | Plus |
| CG5704-RB | 1008 | CG5704-PB | 34..344 | 44..354 | 535 | 78.1 | Plus |
| CG15879-RA | 1029 | CG15879-PA | 809..911 | 819..921 | 230 | 81.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:47:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15820-RA | 1183 | CG15820-RA | 191..1117 | 17..943 | 4470 | 98.8 | Plus |
| CG15879-RA | 1389 | CG15879-RA | 176..534 | 56..414 | 730 | 80.2 | Plus |
| CG5704-RB | 1289 | CG5704-RB | 159..469 | 44..354 | 535 | 78.1 | Plus |
| CG15879-RA | 1389 | CG15879-RA | 948..1050 | 819..921 | 230 | 81.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:47:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2173061..2173981 | 943..23 | 4440 | 98.8 | Minus |
| 3L | 28110227 | 3L | 2168405..2168763 | 414..56 | 730 | 80.2 | Minus |
| 3L | 28110227 | 3L | 2170373..2170683 | 354..44 | 535 | 78.1 | Minus |
| 3L | 28110227 | 3L | 2172503..2172675 | 222..50 | 310 | 78.6 | Minus |
| 3L | 28110227 | 3L | 2169806..2169949 | 924..781 | 255 | 78.5 | Minus |
| 3L | 28110227 | 3L | 2167889..2167991 | 921..819 | 230 | 81.6 | Minus |
| 3L | 28110227 | 3L | 2171850..2172028 | 885..707 | 205 | 74.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:47:50 has no hits.
BS32906.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:24 Download gff for
BS32906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15820-RA | 191..1115 | 17..941 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:23:17 Download gff for
BS32906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15820-RA | 191..1115 | 17..941 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:17 Download gff for
BS32906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2173063..2173987 | 17..941 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:24 Download gff for
BS32906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2173063..2173987 | 17..941 | 98 | | Minus |
BS32906.pep Sequence
Translation from 16 to 942
> BS32906.pep
MHKRLQYEEVMIPAPWGHIAGRWYGNRADRPILAIHGWLDNLGTFDRLIP
LLPDYIGVLCIDLPGHGRSSRLPPGVPYNVYDYVFIIPRVMKEFGWSKVS
LMGHSLGGVMSFMYAAMAPSTVDMIISLDVLLPRRIEDPSKLTKDIEGYL
LEERRQADGTEHEPPSFTLSKLRETLARNSNNSVPQHLADHMLHRQVAKS
NMYPEKVFFSRDGRVKFYHIFDIENGLALEMARRIEKKPYLVIKGSLSPF
VGPRCNETMSILSHDNPNFEFYEVEGGKHHVHLHAAEECARYIVPFIRNH
RPPRSSKL*
BS32906.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15820-PA | 308 | CG15820-PA | 1..308 | 1..308 | 1653 | 100 | Plus |
| CG5704-PB | 335 | CG5704-PB | 9..304 | 7..303 | 1096 | 68.4 | Plus |
| CG5704-PA | 335 | CG5704-PA | 9..304 | 7..303 | 1096 | 68.4 | Plus |
| CG15879-PA | 342 | CG15879-PA | 6..305 | 7..303 | 1074 | 65.1 | Plus |
| CG5707-PA | 357 | CG5707-PA | 21..317 | 9..303 | 783 | 48 | Plus |
