BS32907.complete Sequence
1667 bp assembled on 2014-03-03
GenBank Submission: KX805029
> BS32907.complete
GAAGTTATCAGTCGACATGTATAATTTACGCCTGCTACGAAATCTCCTGC
CGATCGCCGGGCACGCCCATCCGCGCTGGCTGGCTAGCCAGCACAAGCGA
CGCCCGCAGCCGGGCAGCCTGCCGGCCGATCGTCTGGACCAGCTGCGCAG
TGATCTCTTCGAGCGTCGCCATGAGCTGAGTGGCGCGGAGTGGACGGAGG
TGCGGAGGTCGCTCGTGGACGGGTACAAGCACATCAACGGGCACAACGTG
GACGCCGTCATTCTGGGCGTGTGCAGTGCACCCAACCAATTGTCGTTGGC
CAAAAGCTATGTGGAGTTCCTGAGGAGCAGGGGCTCCAAACCGAATGCAG
CGACACTGGGTCGCCTGCTGAGGGTCTACAATGCCGCCTACCACGAGCGA
CCGCTTAGCGAGGCGGAACAGTCGGAGATACTGCAGATCTGCCGATCATT
GCAGGCGGAGCACGAAACTCTGGACGCCAGCAGCTGCGAGAATGTGATTC
ATGGACTGGTGGCCACCAGCGGCGATGATTGGCAGCGCGGACTGCCGCTG
CTCGAGATGATGAAGGTCACCAGTACGCCCAGTGTGGCTGCCTACTCCGC
GCTGGCGGAGAAGGCCTTCAGTGTGGCGACACCGGAGCAGGAATTGGCCT
GGCGCCTACTGGAAGAGATGGCCACGGCACGGAAGCCGCCCAAATGCGAG
GTCTATCTGGCGCTGCTCAATCGACTGGCCAACGAAACGGCACAACTTCC
TGCACAGCTTAGCCTTTTGTTGCAATTCCTCGAACGCCATGAGATTCTAG
TCAGCCAGCGGGTGGCGATACGATTGCAGGAGCTGTCCAGCCAGGTGCCC
CAACTGTTGCACACCAGGACCACCCATTTGGGAGGTCTGGGCAAGTGCCA
GTCCTGCCAGCAGCACCTCCAGCCGGTGGCCATCAGCGATGAGGAGTTCC
GGCAGCTAAGCGAATGTTTTCTGGAGCGCGTGCTCATACGACGAGACGTC
TTCCAGCGCTCCACGCCCGAGGAGGTGGCCAGGTTCAAGAAGTTTGTCGA
AAAGACGGCGCCATACGACTGTGTAATCGATGGCCTCAATGTGGCCTACT
CTACGGGCACCAAAAAGACGCCGCAGCAGCTGGCCAAGCTAGTGGCTACG
GTGGTGCGTCATTTCCGGGAACAGGACAAGCGTGTCCTCGTCCTGGGACG
CGAGCACATGCGCAACTGGTCCAAGCAGGCCATGCACTATGTGCACTGCA
ATGCCAGCCTCTTCTTGACCAGCAATCTGTCGCACGATGATCCCTTCCTG
CTGTATGCCACGCTGCGCAGCGGCCAGGAGACAGACTTCTTCTCCCGCGA
CCTGATGCGCAGTCACGCCTTTCATCTGGGCACCGAGCTGAAGCCCATCT
TTCGTCGCTGGCAGCAGGAGCACCAGTTCTCCCTGGTCACCCAAACGCAA
ACGGGTCAGATTATAGTCAAGGAGCCCGTTCGTCATCGGCTGTGTGCCCA
CCAAGTGGCGGACACCTGGCATGTGCCCTACTGCGCGCAGTACACGCCGC
ATCCCACAGACAGCTTCGAGGTGCCCGCCAACTGGCTATGCATCCAGATG
AAGGAGCAGACGATACCCGCCACCAAAACCAAGACCAAAACAACGAGGTG
AAAGCTTTCTAGACCAT
BS32907.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:03:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15896-RB | 1635 | CG15896-PB | 1..1635 | 17..1651 | 8100 | 99.7 | Plus |
| CG15896-RA | 1635 | CG15896-PA | 1..1635 | 17..1651 | 8100 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:03:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15896-RB | 2809 | CG15896-RB | 105..1739 | 17..1651 | 8100 | 99.7 | Plus |
| CG15896-RA | 1785 | CG15896-RA | 105..1739 | 17..1651 | 8100 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:03:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6291407..6292670 | 17..1280 | 6260 | 99.7 | Plus |
| X | 23542271 | X | 6292735..6293107 | 1279..1651 | 1850 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:03:40 has no hits.
BS32907.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:25:40 Download gff for
BS32907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15896-RA | 65..1698 | 17..1650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:30:28 Download gff for
BS32907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15896-RA | 105..1738 | 17..1650 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:30:28 Download gff for
BS32907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6291407..6292668 | 17..1278 | 99 | -> | Plus |
| X | 6292735..6293106 | 1279..1650 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:25:40 Download gff for
BS32907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6186768..6187139 | 1279..1650 | 99 | | Plus |
| arm_X | 6185440..6186701 | 17..1278 | 99 | -> | Plus |
BS32907.pep Sequence
Translation from 16 to 1650
> BS32907.pep
MYNLRLLRNLLPIAGHAHPRWLASQHKRRPQPGSLPADRLDQLRSDLFER
RHELSGAEWTEVRRSLVDGYKHINGHNVDAVILGVCSAPNQLSLAKSYVE
FLRSRGSKPNAATLGRLLRVYNAAYHERPLSEAEQSEILQICRSLQAEHE
TLDASSCENVIHGLVATSGDDWQRGLPLLEMMKVTSTPSVAAYSALAEKA
FSVATPEQELAWRLLEEMATARKPPKCEVYLALLNRLANETAQLPAQLSL
LLQFLERHEILVSQRVAIRLQELSSQVPQLLHTRTTHLGGLGKCQSCQQH
LQPVAISDEEFRQLSECFLERVLIRRDVFQRSTPEEVARFKKFVEKTAPY
DCVIDGLNVAYSTGTKKTPQQLAKLVATVVRHFREQDKRVLVLGREHMRN
WSKQAMHYVHCNASLFLTSNLSHDDPFLLYATLRSGQETDFFSRDLMRSH
AFHLGTELKPIFRRWQQEHQFSLVTQTQTGQIIVKEPVRHRLCAHQVADT
WHVPYCAQYTPHPTDSFEVPANWLCIQMKEQTIPATKTKTKTTR*
BS32907.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:02:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15896-PB | 544 | CG15896-PB | 1..544 | 1..544 | 2840 | 100 | Plus |
| CG15896-PA | 544 | CG15896-PA | 1..544 | 1..544 | 2840 | 100 | Plus |
